RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ABRAXAS1Q6UWZ7 409 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 CERS6Q6ZMG9 384 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 SYVN1Q86TM6 617 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 ZNF547Q8IVP9 402 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 CCNYQ8ND76 341 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 SLC41A2Q96JW4 573 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 NUP85Q9BW27 656 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 CHMP5Q9NZZ3 219 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 AMACRQ9UHK6 382 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 WDR37Q9Y2I8 494 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 KCNK1O00180 336 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 CDK14O94921 469 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 ARL4DP49703 201 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 DCDC1P59894 354 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 PDE1BQ01064 536 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 GBE1Q04446 702 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 CHRNA6Q15825 494 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 STX1AQ16623 288 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 ATP13A4Q4VNC1 1196 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 JMJD6Q6NYC1 403 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 SASS6Q6UVJ0 657 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 MAMDC2Q7Z304 686 aaPredicted RBP13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 TRAPPC5Q8IUR0 188 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 RBM12BQ8IXT5 1001 aaKnown RBP13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 TRAM1L1Q8N609 369 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 NIPA2Q8N8Q9 360 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 GPR150Q8NGU9 434 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 UBXN4Q92575 508 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 MR1Q95460 341 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 FATE1Q969F0 183 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 TSGA13Q96PP4 275 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 THAP2Q9H0W7 228 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 ISCUQ9H1K1 167 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 MLXIPLQ9NP71 852 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 FGF21Q9NSA1 209 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 ANO10Q9NW15 660 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 AIPL1Q9NZN9 384 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 EPHA6Q9UF33 1036 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 IP6K2Q9UHH9 426 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 SPTBP11277 2137 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 ABCA12Q86UK0 2595 aa13.73□□□□□ -0.21
SMARCA4-206ENST00000538456 A6NL46 340 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 CPNE3O75131 537 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 SCRG1O75711 98 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 CLDN1O95832 211 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 JCHAINP01591 159 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 VCLP18206 1134 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 DCTP40126 519 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 PRKCIP41743 596 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 HALP42357 657 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 ACY1Q03154 408 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 LAMB3Q13751 1172 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 PLCL1Q15111 1095 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 GPR19Q15760 415 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 PCSK7Q16549 785 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 DNTTIP2Q5QJE6 756 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 AGAP9Q5VTM2 703 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 FAM69BQ5VUD6 431 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 PAPD7Q5XG87 772 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 CPNE8Q86YQ8 564 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 TMEM126BQ8IUX1 230 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 Q8NA96 180 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 GDAP1Q8TB36 358 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 FAM71BQ8TC56 605 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 ZNF514Q96K75 400 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 MAP3K3Q99759 626 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 CEP41Q9BYV8 373 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 SLC29A3Q9BZD2 475 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 GPR63Q9BZJ6 419 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 RAB33BQ9H082 229 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 SLAMF7Q9NQ25 335 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 PSMD13Q9UNM6 376 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 FARSAQ9Y285 508 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 ZNF711Q9Y462 761 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 ZNF451Q9Y4E5 1061 aa13.72□□□□□ -0.21
SMARCA4-206ENST00000538456 VEGFDO43915 354 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 DDAH2O95865 285 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 BPIP17213 487 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 FECHP22830 423 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 ARSEP51690 589 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 SLC10A2Q12908 348 aaPredicted RBP13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 ZBTB17Q13105 803 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 GPS2Q13227 327 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 HADHQ16836 314 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 CCDC183Q5T5S1 534 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 SLC6A19Q695T7 634 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 PDPK2PQ6A1A2 396 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 WASH2PQ6VEQ5 465 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 RBM43Q6ZSC3 357 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 C11orf96Q7Z7L8 435 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 CNTD1Q8N815 330 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 KCTD6Q8NC69 237 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 FDCSPQ8NFU4 85 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 FCRL4Q96PJ5 515 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 TRIB3Q96RU7 358 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 ZNF670Q9BS34 389 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 NUDT9Q9BW91 350 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 CHST8Q9H2A9 424 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 WASH6PQ9NQA3 447 aa13.71□□□□□ -0.21
SMARCA4-206ENST00000538456 TMPRSS11EQ9UL52 423 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms