RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 PPP2R2BQ00005 443 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 PLGLB1Q02325 96 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 BBS12Q6ZW61 710 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 CLIP4Q8N3C7 705 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 PTCD2Q8WV60 388 aaKnown RBP11.1□□□□□ -0.63
LINC00346-201ENST00000538077 FRMD6Q96NE9 622 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 GKN1Q9NS71 199 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 MTX2O75431 263 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 POP4O95707 220 aaKnown RBP11.1□□□□□ -0.63
LINC00346-201ENST00000538077 DDX6P26196 483 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC00346-201ENST00000538077 IL12RB1P42701 662 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 FBXW8Q8N3Y1 598 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 DPYSL5Q9BPU6 564 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 C11orf84Q9BUA3 381 aaPredicted RBP11.1□□□□□ -0.63
LINC00346-201ENST00000538077 CHMP1AQ9HD42 196 aaPredicted RBP11.1□□□□□ -0.63
LINC00346-201ENST00000538077 PDP1Q9P0J1 537 aaPredicted RBP11.1□□□□□ -0.63
LINC00346-201ENST00000538077 PHF11Q9UIL8 331 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 ZNF536O15090 1300 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 PLOD3O60568 738 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 STX11O75558 287 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 POU2F1P14859 743 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 PDHA2P29803 388 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 AIF1P55008 147 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 LILRA4P59901 499 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 FASTKD3Q14CZ7 662 aaKnown RBP11.1□□□□□ -0.63
LINC00346-201ENST00000538077 VPS26BQ4G0F5 336 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 GCNT6Q5T4J0 391 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 STRADAQ7RTN6 431 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 ZNF598Q86UK7 904 aaKnown RBP11.1□□□□□ -0.63
LINC00346-201ENST00000538077 SLC34A3Q8N130 599 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 ZNF567Q8N184 647 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 HEXDCQ8WVB3 486 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 TIFAQ96CG3 184 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 GAL3ST1Q99999 423 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 ACBD6Q9BR61 282 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 SLCO1B3Q9NPD5 702 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 ABCB10Q9NRK6 738 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 TMEM51Q9NW97 253 aa11.1□□□□□ -0.63
LINC00346-201ENST00000538077 MT-ND1P03886 318 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 ACLYP53396 1101 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 MON1BQ7L1V2 547 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 RDH11Q8TC12 318 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 PLEKHG4BQ96PX9 1271 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 HMGXB4Q9UGU5 601 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 MRPS17Q9Y2R5 130 aaKnown RBP11.09□□□□□ -0.63
LINC00346-201ENST00000538077 IFNGP01579 166 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 ELF3P78545 371 aaPredicted RBP11.09□□□□□ -0.63
LINC00346-201ENST00000538077 LGALS3BPQ08380 585 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 NOMO1Q15155 1222 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 ATCAYQ86WG3 371 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 ZNF433Q8N7K0 673 aaPredicted RBP11.09□□□□□ -0.63
LINC00346-201ENST00000538077 OR2L5Q8NG80 312 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 STYXQ8WUJ0 223 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 ALG2Q9H553 416 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 MCCC2Q9HCC0 563 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 CLDN4O14493 209 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 ACP5P13686 325 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 SLC7A2P52569 658 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 SMIM11AP58511 58 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 RTL4Q6ZR62 310 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 CXXC5Q7LFL8 322 aaKnown RBP11.09□□□□□ -0.63
LINC00346-201ENST00000538077 STK32AQ8WU08 396 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 NKD1Q969G9 470 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 TSPAN18Q96SJ8 248 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 TMEM27Q9HBJ8 222 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 EIF2B4Q9UI10 523 aaKnown RBP11.09□□□□□ -0.63
LINC00346-201ENST00000538077 MAPRE3Q9UPY8 281 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 PRODHO43272 600 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 B3GALT2O43825 422 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 DBIP07108 87 aaKnown RBP11.09□□□□□ -0.63
LINC00346-201ENST00000538077 COL9A3Q14050 684 aaPredicted RBP11.09□□□□□ -0.63
LINC00346-201ENST00000538077 PERM1Q5SV97 790 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 KCTD8Q6ZWB6 473 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 PSMA8Q8TAA3 256 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 CDK15Q96Q40 435 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 AGAP2Q99490 1192 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 NIFKQ9BYG3 293 aaKnown RBP11.09□□□□□ -0.63
LINC00346-201ENST00000538077 MMADHCQ9H3L0 296 aaPredicted RBP11.09□□□□□ -0.63
LINC00346-201ENST00000538077 CARS2Q9HA77 564 aaKnown RBP11.09□□□□□ -0.63
LINC00346-201ENST00000538077 SAR1AQ9NR31 198 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 PCDHB1Q9Y5F3 818 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 CAMTA1Q9Y6Y1 1673 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 KHNYNO15037 678 aaKnown RBP11.09□□□□□ -0.63
LINC00346-201ENST00000538077 LRIG2O94898 1065 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 SLC35G6P0C7Q6 338 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 ADH5P11766 374 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 PAX3P23760 479 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 DMPKQ09013 629 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 ESRP1Q6NXG1 681 aaKnown RBP11.09□□□□□ -0.63
LINC00346-201ENST00000538077 POTEHQ6S545 545 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 RASSF6Q6ZTQ3 369 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 GALNT7Q86SF2 657 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 CAMK1DQ8IU85 385 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 INPP4AQ96PE3 977 aaPredicted RBP11.09□□□□□ -0.63
LINC00346-201ENST00000538077 KXD1Q9BQD3 176 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 TRMT61BQ9BVS5 477 aaKnown RBP11.09□□□□□ -0.63
LINC00346-201ENST00000538077 AP3M1Q9Y2T2 418 aa11.09□□□□□ -0.63
LINC00346-201ENST00000538077 BAZ2BQ9UIF8 2168 aaKnown RBP11.09□□□□□ -0.63
LINC00346-201ENST00000538077 PRMT5O14744 637 aaPredicted RBP11.08□□□□□ -0.64
LINC00346-201ENST00000538077 NDST3O95803 873 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms