RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 CTSCP53634 463 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 COL28A1Q2UY09 1125 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 WDR74Q6RFH5 385 aaPredicted RBP16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 LRRC69Q6ZNQ3 347 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 USP53Q70EK8 1073 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 TRAPPC5Q8IUR0 188 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 HNRNPLLQ8WVV9 542 aaKnown RBP16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 C1orf54Q8WWF1 131 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 DCBLD2Q96PD2 775 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 SLC38A3Q99624 504 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 CMKLR1Q99788 373 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 DPH1Q9BZG8 443 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 B3GNT4Q9C0J1 378 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 OSGEPL1Q9H4B0 414 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 EPB41L1Q9H4G0 881 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 ASB8Q9H765 288 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 SCHIP1Q9P0W5 487 aaPredicted RBP16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 LHX6Q9UPM6 363 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 ZNF148Q9UQR1 794 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 DRG1Q9Y295 367 aaKnown RBP16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 ATMQ13315 3056 aa16.92■□□□□ 0.3
SFSWAP-205ENST00000537164 TRBV5-4A0A0C4DH59 114 aa16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 KLHL33A6NCF5 533 aa16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 LILRA5A6NI73 299 aa16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 NVLO15381 856 aaKnown RBP16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 THRAP10827 490 aa16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 HOXB3P14651 431 aaPredicted RBP16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 IDSP22304 550 aa16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 ITPKBP27987 946 aa16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 PLA2G4EQ3MJ16 856 aa16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 GPR33Q49SQ1 333 aa16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 NKAIN2Q5VXU1 208 aa16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 TMEM71Q6P5X7 295 aa16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 C19orf48Q6RUI8 117 aa16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 AMZ2Q86W34 360 aa16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 OR10G6Q8NH81 332 aa16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 MAIP1Q8WWC4 291 aa16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 NLE1Q9NVX2 485 aaPredicted RBP16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 ZNF624Q9P2J8 865 aaPredicted RBP16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 DNAJC16Q9Y2G8 782 aa16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 LOXL2Q9Y4K0 774 aa16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 AHCTF1Q8WYP5 2266 aa16.91■□□□□ 0.3
SFSWAP-205ENST00000537164 IGLV3-16A0A075B6K0 115 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 MROH6A6NGR9 719 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 DUX1O43812 170 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 POP7O75817 140 aaKnown RBP16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 SLC19A1P41440 591 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 TLE3Q04726 772 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 SEMA5AQ13591 1074 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 C16orf72Q14CZ0 275 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 LONRF2Q1L5Z9 754 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 BCL7AQ4VC05 210 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 PHF19Q5T6S3 580 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 TMEM220Q6QAJ8 160 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 SNX20Q7Z614 316 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 SPACA3Q8IXA5 215 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 RBM12BQ8IXT5 1001 aaKnown RBP16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 NXPE1Q8N323 547 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 STYXQ8WUJ0 223 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 ULK4Q96C45 1275 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 CCDC97Q96F63 343 aaPredicted RBP16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 LINC00615Q96LM1 132 aaPredicted RBP16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 ETNK1Q9HBU6 452 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 POT1Q9NUX5 634 aa16.9■□□□□ 0.3
SFSWAP-205ENST00000537164 PIKFYVEQ9Y2I7 2098 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 GOLGA6L3A6NEY3 463 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 OR2AG2A6NM03 316 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 SGTAO43765 313 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 KALRNO60229 2985 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 FGGP02679 453 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 JMJD7P0C870 316 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 HGFP14210 728 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 MSH3P20585 1137 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 RPL10P27635 214 aaKnown RBP16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 CCDC173Q0VFZ6 552 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 CDH17Q12864 832 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 METRNLQ641Q3 311 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 FOXR1Q6PIV2 292 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 TMEM26Q6ZUK4 368 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 ZNF761Q86XN6 746 aaPredicted RBP16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 HEXDCQ8WVB3 486 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 CDKN2AIPNLQ96HQ2 116 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 DNAJC1Q96KC8 554 aaKnown RBP16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 CCDC74BQ96LY2 380 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 SLC40A1Q9NP59 571 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 AKAP7Q9P0M2 348 aaPredicted RBP16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 PAK5Q9P286 719 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 RIMKLBQ9ULI2 386 aa16.89■□□□□ 0.29
SFSWAP-205ENST00000537164 MGAT4DA6NG13 374 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 PDZK1P1A8MUH7 402 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 VIPP01282 170 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 IFNB1P01574 187 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 TPH1P17752 444 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 ITIH1P19827 911 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 ITGALP20701 1170 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 SLC5A2P31639 672 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 AKT1P31749 480 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 MC4RP32245 332 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 SNX1Q13596 522 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 POU6F1Q14863 301 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms