RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 RRP8O43159 456 aaKnown RBP14.03□□□□□ -0.16
UBE3B-206ENST00000536398 FGGP02679 453 aa14.03□□□□□ -0.16
UBE3B-206ENST00000536398 CCL4P13236 92 aa14.03□□□□□ -0.16
UBE3B-206ENST00000536398 MSH3P20585 1137 aa14.03□□□□□ -0.16
UBE3B-206ENST00000536398 PBLDP30039 288 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-206ENST00000536398 STIP1P31948 543 aaKnown RBP14.03□□□□□ -0.16
UBE3B-206ENST00000536398 SLC19A1P41440 591 aa14.03□□□□□ -0.16
UBE3B-206ENST00000536398 MAPK9P45984 424 aa14.03□□□□□ -0.16
UBE3B-206ENST00000536398 PPM1FP49593 454 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-206ENST00000536398 LIMK2P53671 638 aa14.03□□□□□ -0.16
UBE3B-206ENST00000536398 PCBP4P57723 403 aaKnown RBP14.03□□□□□ -0.16
UBE3B-206ENST00000536398 SEPT6Q14141 434 aa14.03□□□□□ -0.16
UBE3B-206ENST00000536398 CLCA4Q14CN2 919 aa14.03□□□□□ -0.16
UBE3B-206ENST00000536398 FNBP1LQ5T0N5 605 aa14.03□□□□□ -0.16
UBE3B-206ENST00000536398 SLC9B2Q86UD5 537 aa14.03□□□□□ -0.16
UBE3B-206ENST00000536398 SPACA3Q8IXA5 215 aa14.03□□□□□ -0.16
UBE3B-206ENST00000536398 OR52K1Q8NGK4 314 aa14.03□□□□□ -0.16
UBE3B-206ENST00000536398 UBE2Q2Q8WVN8 375 aa14.03□□□□□ -0.16
UBE3B-206ENST00000536398 FRMD8P1Q9BZ68 369 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-206ENST00000536398 THSD1Q9NS62 852 aa14.03□□□□□ -0.16
UBE3B-206ENST00000536398 NBEAQ8NFP9 2946 aa14.03□□□□□ -0.16
UBE3B-206ENST00000536398 KIR2DS5A0A0G2JLQ3 304 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 A0A0G2JNG1 304 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 GOLGA6L3A6NEY3 463 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 KIR2DS3K7RE56 304 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 SGTAO43765 313 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 CEP104O60308 925 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 ITGA2BP08514 1039 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 XRCC1P18887 633 aaPredicted RBP14.02□□□□□ -0.17
UBE3B-206ENST00000536398 SLC5A2P31639 672 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 AKT1P31749 480 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 MC4RP32245 332 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 RPL22P35268 128 aaKnown RBP14.02□□□□□ -0.17
UBE3B-206ENST00000536398 ABCG1P45844 678 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 KCNJ1P48048 391 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 TLE3Q04726 772 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 EIF3IQ13347 325 aaKnown RBP14.02□□□□□ -0.17
UBE3B-206ENST00000536398 SQSTM1Q13501 440 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 NFE2L1Q14494 772 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 KIR2DS5Q14953 304 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 CCDC38Q502W7 563 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 SNAP47Q5SQN1 464 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 TMEM71Q6P5X7 295 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 ABRAXAS1Q6UWZ7 409 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 XKR5Q6UX68 686 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 LRRC69Q6ZNQ3 347 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 CLEC14AQ86T13 490 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 PDZD3Q86UT5 571 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 AMZ2Q86W34 360 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 JAMLQ86YT9 394 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 REXO1L1PQ8IX06 675 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 ZNF248Q8NDW4 579 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 TRIM58Q8NG06 486 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 NCSTNQ92542 709 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 PMEPA1Q969W9 287 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 AHCYL2Q96HN2 611 aaKnown RBP14.02□□□□□ -0.17
UBE3B-206ENST00000536398 KCNF1Q9H3M0 494 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 FEZ2Q9UHY8 353 aaPredicted RBP14.02□□□□□ -0.17
UBE3B-206ENST00000536398 SLC30A1Q9Y6M5 507 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 CHD6Q8TD26 2715 aa14.02□□□□□ -0.17
UBE3B-206ENST00000536398 OR5K4A6NMS3 321 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 AGAP14A8MT82 685 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 A8MU76 341 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 PSMD3O43242 534 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 ZW10O43264 779 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 VIPP01282 170 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 JMJD7P0C870 316 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 THRAP10827 490 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 SLC2A4P14672 509 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 IDSP22304 550 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 ARSDP51689 593 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 MAPK10P53779 464 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 GPLD1P80108 840 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 PDE1BQ01064 536 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 CCNG2Q16589 344 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 AGAP9Q5VTM2 703 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 LILRA3Q8N6C8 439 aaPredicted RBP14.01□□□□□ -0.17
UBE3B-206ENST00000536398 OR4D9Q8NGE8 314 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 OR10G6Q8NH81 332 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 KCNE4Q8WWG9 221 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 USP7Q93009 1102 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 SH3KBP1Q96B97 665 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 LRRC45Q96CN5 670 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 CDKN2AIPNLQ96HQ2 116 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 CMKLR1Q99788 373 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 ZCCHC2Q9C0B9 1178 aaKnown RBP14.01□□□□□ -0.17
UBE3B-206ENST00000536398 RAB6BQ9NRW1 208 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 NLE1Q9NVX2 485 aaPredicted RBP14.01□□□□□ -0.17
UBE3B-206ENST00000536398 OGFRQ9NZT2 677 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 FOXJ2Q9P0K8 574 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 FAM8A1Q9UBU6 413 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 CRLS1Q9UJA2 301 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 PSMD13Q9UNM6 376 aa14.01□□□□□ -0.17
UBE3B-206ENST00000536398 ITPR1Q14643 2758 aa14□□□□□ -0.17
UBE3B-206ENST00000536398 MROH6A6NGR9 719 aa14□□□□□ -0.17
UBE3B-206ENST00000536398 OR51F1A6NGY5 319 aa14□□□□□ -0.17
UBE3B-206ENST00000536398 C9orf172C9J069 976 aa14□□□□□ -0.17
UBE3B-206ENST00000536398 KLK10O43240 276 aa14□□□□□ -0.17
UBE3B-206ENST00000536398 DUX1O43812 170 aa14□□□□□ -0.17
UBE3B-206ENST00000536398 PRAMEF10O60809 474 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms