RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 PIGMQ9H3S5 423 aa4.01□□□□□ -1.77
VBP1-203ENST00000535916 CCDC177Q9NQR7 707 aaPredicted RBP4.01□□□□□ -1.77
VBP1-203ENST00000535916 PLCXD1Q9NUJ7 323 aa4.01□□□□□ -1.77
VBP1-203ENST00000535916 ASIC3Q9UHC3 531 aa4.01□□□□□ -1.77
VBP1-203ENST00000535916 COMMD10Q9Y6G5 202 aa4.01□□□□□ -1.77
VBP1-203ENST00000535916 MAU2Q9Y6X3 613 aa4.01□□□□□ -1.77
VBP1-203ENST00000535916 ATP2A1O14983 1001 aa4□□□□□ -1.77
VBP1-203ENST00000535916 EML2O95834 649 aa4□□□□□ -1.77
VBP1-203ENST00000535916 F9P00740 461 aa4□□□□□ -1.77
VBP1-203ENST00000535916 NGFP01138 241 aa4□□□□□ -1.77
VBP1-203ENST00000535916 HMBSP08397 361 aa4□□□□□ -1.77
VBP1-203ENST00000535916 FAM157CP0CG43 387 aa4□□□□□ -1.77
VBP1-203ENST00000535916 EPHA2P29317 976 aa4□□□□□ -1.77
VBP1-203ENST00000535916 MMP15P51511 669 aa4□□□□□ -1.77
VBP1-203ENST00000535916 F2RL1P55085 397 aa4□□□□□ -1.77
VBP1-203ENST00000535916 KCNJ10P78508 379 aa4□□□□□ -1.77
VBP1-203ENST00000535916 TRPC3Q13507 836 aa4□□□□□ -1.77
VBP1-203ENST00000535916 PNLIPRP3Q17RR3 467 aa4□□□□□ -1.77
VBP1-203ENST00000535916 ZNF805Q5CZA5 627 aa4□□□□□ -1.77
VBP1-203ENST00000535916 LCE3AQ5TA76 89 aa4□□□□□ -1.77
VBP1-203ENST00000535916 NDUFAF5Q5TEU4 345 aa4□□□□□ -1.77
VBP1-203ENST00000535916 ZNF613Q6PF04 617 aa4□□□□□ -1.77
VBP1-203ENST00000535916 GSTA5Q7RTV2 222 aa4□□□□□ -1.77
VBP1-203ENST00000535916 ISCA2Q86U28 154 aa4□□□□□ -1.77
VBP1-203ENST00000535916 EMC1Q8N766 993 aa4□□□□□ -1.77
VBP1-203ENST00000535916 PAF1Q8N7H5 531 aa4□□□□□ -1.77
VBP1-203ENST00000535916 AMER3Q8N944 861 aa4□□□□□ -1.77
VBP1-203ENST00000535916 UBXN10Q96LJ8 280 aa4□□□□□ -1.77
VBP1-203ENST00000535916 NR1H4Q96RI1 486 aaPredicted RBP4□□□□□ -1.77
VBP1-203ENST00000535916 PCDHB16Q9NRJ7 776 aa4□□□□□ -1.77
VBP1-203ENST00000535916 NOL12Q9UGY1 213 aaKnown RBP eCLIP4□□□□□ -1.77
VBP1-203ENST00000535916 PLEKHD1A6NEE1 506 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 JRKO75564 520 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 TRMUO75648 421 aaKnown RBP3.99□□□□□ -1.77
VBP1-203ENST00000535916 BMP10O95393 424 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 WNT5AP41221 380 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 EIF3BP55884 814 aaKnown RBP3.99□□□□□ -1.77
VBP1-203ENST00000535916 SNRPD1P62314 119 aaKnown RBP3.99□□□□□ -1.77
VBP1-203ENST00000535916 ENPP2Q13822 863 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 SNAI3Q3KNW1 292 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 XKR6Q5GH73 641 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 SLC9C2Q5TAH2 1124 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 ALS2CLQ60I27 953 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 SDCCAG8Q86SQ7 713 aaPredicted RBP3.99□□□□□ -1.77
VBP1-203ENST00000535916 RASGEF1CQ8N431 466 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 C1orf52Q8N6N3 182 aaKnown RBP3.99□□□□□ -1.77
VBP1-203ENST00000535916 ZNF614Q8N883 585 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 SLC38A9Q8NBW4 561 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 OR2T12Q8NG77 320 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 NFKBIDQ8NI38 313 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 MRGPRDQ8TDS7 321 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 SLC47A1Q96FL8 570 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 HERPUD2Q9BSE4 406 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 MAGIXQ9H6Y5 334 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 GGA3Q9NZ52 723 aa3.99□□□□□ -1.77
VBP1-203ENST00000535916 CNOT8Q9UFF9 292 aaKnown RBP3.99□□□□□ -1.77
VBP1-203ENST00000535916 C15orf62A8K5M9 175 aa3.98□□□□□ -1.77
VBP1-203ENST00000535916 EIF3CLB5ME19 914 aaKnown RBP3.98□□□□□ -1.77
VBP1-203ENST00000535916 ICAM1P05362 532 aa3.98□□□□□ -1.77
VBP1-203ENST00000535916 ABCD3P28288 659 aa3.98□□□□□ -1.77
VBP1-203ENST00000535916 SLC6A12P48065 614 aa3.98□□□□□ -1.77
VBP1-203ENST00000535916 CTSCP53634 463 aa3.98□□□□□ -1.77
VBP1-203ENST00000535916 SLC8A3P57103 927 aa3.98□□□□□ -1.77
VBP1-203ENST00000535916 KRTAP12-2P59991 146 aa3.98□□□□□ -1.77
VBP1-203ENST00000535916 CD81P60033 236 aa3.98□□□□□ -1.77
VBP1-203ENST00000535916 ARHGEF16Q5VV41 709 aa3.98□□□□□ -1.77
VBP1-203ENST00000535916 CDC73Q6P1J9 531 aa3.98□□□□□ -1.77
VBP1-203ENST00000535916 CYP26C1Q6V0L0 522 aa3.98□□□□□ -1.77
VBP1-203ENST00000535916 PTOV1Q86YD1 416 aa3.98□□□□□ -1.77
VBP1-203ENST00000535916 GCC1Q96CN9 775 aa3.98□□□□□ -1.77
VBP1-203ENST00000535916 MMABQ96EY8 250 aaPredicted RBP3.98□□□□□ -1.77
VBP1-203ENST00000535916 RTP3Q9BQQ7 232 aa3.98□□□□□ -1.77
VBP1-203ENST00000535916 ECHDC1Q9NTX5 307 aa3.98□□□□□ -1.77
VBP1-203ENST00000535916 UBA2Q9UBT2 640 aaPredicted RBP3.98□□□□□ -1.77
VBP1-203ENST00000535916 YIPF1Q9Y548 306 aa3.98□□□□□ -1.77
VBP1-203ENST00000535916 PCNX3Q9H6A9 2034 aa3.97□□□□□ -1.77
VBP1-203ENST00000535916 TEX13DA0A0J9YY54 714 aaPredicted RBP3.97□□□□□ -1.77
VBP1-203ENST00000535916 CSPG5O95196 566 aa3.97□□□□□ -1.77
VBP1-203ENST00000535916 MOCS3O95396 460 aa3.97□□□□□ -1.77
VBP1-203ENST00000535916 GATA2P23769 480 aaPredicted RBP3.97□□□□□ -1.77
VBP1-203ENST00000535916 PRCPP42785 496 aa3.97□□□□□ -1.77
VBP1-203ENST00000535916 BIRC2Q13490 618 aa3.97□□□□□ -1.77
VBP1-203ENST00000535916 UGP2Q16851 508 aa3.97□□□□□ -1.77
VBP1-203ENST00000535916 TCTEX1D4Q5JR98 221 aa3.97□□□□□ -1.77
VBP1-203ENST00000535916 PLD3Q8IV08 490 aa3.97□□□□□ -1.77
VBP1-203ENST00000535916 GCSAMQ8N6F7 178 aa3.97□□□□□ -1.77
VBP1-203ENST00000535916 ZNF611Q8N823 705 aa3.97□□□□□ -1.77
VBP1-203ENST00000535916 SMPDL3BQ92485 455 aa3.97□□□□□ -1.77
VBP1-203ENST00000535916 TMEM143Q96AN5 459 aa3.97□□□□□ -1.77
VBP1-203ENST00000535916 EGLN2Q96KS0 407 aa3.97□□□□□ -1.77
VBP1-203ENST00000535916 ZNF300Q96RE9 604 aaPredicted RBP3.97□□□□□ -1.77
VBP1-203ENST00000535916 RANBP17Q9H2T7 1088 aaKnown RBP3.97□□□□□ -1.77
VBP1-203ENST00000535916 PELI2Q9HAT8 420 aa3.97□□□□□ -1.77
VBP1-203ENST00000535916 B3GALT5Q9Y2C3 310 aa3.97□□□□□ -1.77
VBP1-203ENST00000535916 ZHX2Q9Y6X8 837 aa3.97□□□□□ -1.77
VBP1-203ENST00000535916 AGRNO00468 2067 aa3.97□□□□□ -1.77
VBP1-203ENST00000535916 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.96□□□□□ -1.78
VBP1-203ENST00000535916 KANSL1LA0AUZ9 987 aa3.96□□□□□ -1.78
VBP1-203ENST00000535916 PRR32B1ATL7 298 aa3.96□□□□□ -1.78
VBP1-203ENST00000535916 SLCO1B7G3V0H7 640 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms