RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 CWH43Q9H720 699 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 CAAP1Q9H8G2 361 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 RIC8BQ9NVN3 520 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 SRRDQ9UH36 339 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 SUN2Q9UH99 717 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 PCDHB9Q9Y5E1 797 aa13.02□□□□□ -0.33
LDLR-203ENST00000535915 PIKFYVEQ9Y2I7 2098 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 ASPDHA6ND91 283 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 H0Y626 953 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 SCAMP3O14828 347 aaKnown RBP13.01□□□□□ -0.33
LDLR-203ENST00000535915 CD160O95971 181 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 OXTRP30559 389 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 PTGER3P43115 390 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 POLR2JP52435 117 aaKnown RBP13.01□□□□□ -0.33
LDLR-203ENST00000535915 ERVK-8P63133 956 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 PLOD1Q02809 727 aaPredicted RBP13.01□□□□□ -0.33
LDLR-203ENST00000535915 GRIK2Q13002 908 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 FRA10AC1Q70Z53 315 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 CARNMT1Q8N4J0 409 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 OR52B6Q8NGF0 335 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 SEPT8Q92599 483 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 CCT7Q99832 543 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 HAUS8Q9BT25 410 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 DUS2Q9NX74 493 aaKnown RBP13.01□□□□□ -0.33
LDLR-203ENST00000535915 TMCO1Q9UM00 188 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 DMTF1Q9Y222 760 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 PKP3Q9Y446 797 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 COMMD10Q9Y6G5 202 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 ARHGAP10A1A4S6 786 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 C2orf78A6NCI8 922 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 INPP4BO15327 924 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 HOXA2O43364 376 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 SYNCRIPO60506 623 aaKnown RBP13.01□□□□□ -0.33
LDLR-203ENST00000535915 H6PDO95479 791 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 SEC24AO95486 1093 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 ESR1P03372 595 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 MTHFD1P11586 935 aaKnown RBP13.01□□□□□ -0.33
LDLR-203ENST00000535915 HMGA1P17096 107 aaKnown RBP13.01□□□□□ -0.33
LDLR-203ENST00000535915 CD9P21926 228 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 FASP25445 335 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 GSK3BP49841 420 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 ADRM1Q16186 407 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 TIGD2Q4W5G0 525 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 ATP6AP1LQ52LC2 224 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 NHSL2Q5HYW2 709 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 HABP4Q5JVS0 413 aaKnown RBP13.01□□□□□ -0.33
LDLR-203ENST00000535915 NCEH1Q6PIU2 408 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 CBR4Q8N4T8 237 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 TRIML2Q8N7C3 387 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 RAET1EQ8TD07 263 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 KCTD14Q9BQ13 255 aaPredicted RBP13.01□□□□□ -0.33
LDLR-203ENST00000535915 GPR63Q9BZJ6 419 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 BRINP2Q9C0B6 783 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 RBM38Q9H0Z9 239 aaKnown RBP13.01□□□□□ -0.33
LDLR-203ENST00000535915 PNPLA3Q9NST1 481 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 SMPD4Q9NXE4 827 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 PTTG2Q9NZH5 202 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 MTRRQ9UBK8 725 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 MYRFQ9Y2G1 1151 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 SLC30A1Q9Y6M5 507 aa13.01□□□□□ -0.33
LDLR-203ENST00000535915 H7C0S8 307 aa13□□□□□ -0.33
LDLR-203ENST00000535915 EEDO75530 441 aaKnown RBP13□□□□□ -0.33
LDLR-203ENST00000535915 ZFP36L2P47974 494 aaKnown RBP13□□□□□ -0.33
LDLR-203ENST00000535915 RHOAP61586 193 aa13□□□□□ -0.33
LDLR-203ENST00000535915 LIPEQ05469 1076 aa13□□□□□ -0.33
LDLR-203ENST00000535915 PLD1Q13393 1074 aa13□□□□□ -0.33
LDLR-203ENST00000535915 BFSP2Q13515 415 aa13□□□□□ -0.33
LDLR-203ENST00000535915 CYP51A1Q16850 503 aa13□□□□□ -0.33
LDLR-203ENST00000535915 TCTN1Q2MV58 587 aa13□□□□□ -0.33
LDLR-203ENST00000535915 C6orf136Q5SQH8 315 aa13□□□□□ -0.33
LDLR-203ENST00000535915 B3GNT6Q6ZMB0 384 aa13□□□□□ -0.33
LDLR-203ENST00000535915 CAMK1DQ8IU85 385 aa13□□□□□ -0.33
LDLR-203ENST00000535915 TMEM199Q8N511 208 aa13□□□□□ -0.33
LDLR-203ENST00000535915 ANKRD60Q9BZ19 345 aa13□□□□□ -0.33
LDLR-203ENST00000535915 AGPAT4Q9NRZ5 378 aa13□□□□□ -0.33
LDLR-203ENST00000535915 SLAMF8Q9P0V8 285 aa13□□□□□ -0.33
LDLR-203ENST00000535915 LEF1Q9UJU2 399 aaPredicted RBP13□□□□□ -0.33
LDLR-203ENST00000535915 PLOD2O00469 737 aa13□□□□□ -0.33
LDLR-203ENST00000535915 NCK1P16333 377 aa13□□□□□ -0.33
LDLR-203ENST00000535915 CTPS1P17812 591 aa13□□□□□ -0.33
LDLR-203ENST00000535915 MZF1P28698 734 aaPredicted RBP13□□□□□ -0.33
LDLR-203ENST00000535915 ALDH7A1P49419 539 aaKnown RBP13□□□□□ -0.33
LDLR-203ENST00000535915 ERVPABLB-1P60509 514 aa13□□□□□ -0.33
LDLR-203ENST00000535915 SPATS1Q496A3 300 aa13□□□□□ -0.33
LDLR-203ENST00000535915 PDCD4Q53EL6 469 aaKnown RBP13□□□□□ -0.33
LDLR-203ENST00000535915 LHX8Q68G74 356 aa13□□□□□ -0.33
LDLR-203ENST00000535915 KIAA1841Q6NSI8 718 aa13□□□□□ -0.33
LDLR-203ENST00000535915 ADGRG5Q8IZF4 528 aa13□□□□□ -0.33
LDLR-203ENST00000535915 STK40Q8N2I9 435 aa13□□□□□ -0.33
LDLR-203ENST00000535915 GOLM1Q8NBJ4 401 aa13□□□□□ -0.33
LDLR-203ENST00000535915 METTL6Q8TCB7 284 aa13□□□□□ -0.33
LDLR-203ENST00000535915 RMND5BQ96G75 393 aaPredicted RBP13□□□□□ -0.33
LDLR-203ENST00000535915 MYRFLQ96LU7 910 aa13□□□□□ -0.33
LDLR-203ENST00000535915 CEP295NLQ96MC4 621 aa13□□□□□ -0.33
LDLR-203ENST00000535915 TMEM74Q96NL1 305 aa13□□□□□ -0.33
LDLR-203ENST00000535915 ZNF382Q96SR6 550 aa13□□□□□ -0.33
LDLR-203ENST00000535915 LHX3Q9UBR4 397 aa13□□□□□ -0.33
LDLR-203ENST00000535915 FCF1Q9Y324 198 aaKnown RBP13□□□□□ -0.33
LDLR-203ENST00000535915 ZNF711Q9Y462 761 aa13□□□□□ -0.33
LDLR-203ENST00000535915 RNF103-CHMP3A0A140T963 221 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms