RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 BAIAP3O94812 1187 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 TOMM70O94826 608 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 F9P00740 461 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 TFP02787 698 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 SNRNP70P08621 437 aaKnown RBP3.48□□□□□ -1.85
USP48-215ENST00000534705 ETFAP13804 333 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 XBP1P17861 261 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 CLNS1AP54105 237 aaKnown RBP3.48□□□□□ -1.85
USP48-215ENST00000534705 RARSP54136 660 aaKnown RBP3.48□□□□□ -1.85
USP48-215ENST00000534705 RPS8P62241 208 aaKnown RBP3.48□□□□□ -1.85
USP48-215ENST00000534705 CXCL9Q07325 125 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 GALNT2Q10471 571 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 ILF3Q12906 894 aaKnown RBP eCLIP3.48□□□□□ -1.85
USP48-215ENST00000534705 DLG1Q12959 904 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 MYBPHQ13203 477 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 RABL6Q3YEC7 729 aaPredicted RBP3.48□□□□□ -1.85
USP48-215ENST00000534705 ATP13A5Q4VNC0 1218 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 OTUD3Q5T2D3 398 aaPredicted RBP3.48□□□□□ -1.85
USP48-215ENST00000534705 WBP2NLQ6ICG8 309 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 PLEKHA7Q6IQ23 1121 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 FAM180BQ6P0A1 224 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 FAM43BQ6ZT52 329 aaPredicted RBP3.48□□□□□ -1.85
USP48-215ENST00000534705 CENPQQ7L2Z9 268 aaPredicted RBP3.48□□□□□ -1.85
USP48-215ENST00000534705 ZNF329Q86UD4 541 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 ZC3HC1Q86WB0 502 aaKnown RBP3.48□□□□□ -1.85
USP48-215ENST00000534705 NFKBIDQ8NI38 313 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 TBC1D16Q8TBP0 767 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 MAGEC3Q8TD91 643 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 WFIKKN2Q8TEU8 576 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 ANKRD7Q92527 254 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 ERGIC1Q969X5 290 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 KLHL29Q96CT2 875 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 MTBPQ96DY7 904 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 IGSF21Q96ID5 467 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 APOPT1Q96IL0 206 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 SLITRK1Q96PX8 696 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 OR1F2PQ96R84 312 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 SERINC2Q96SA4 455 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 H2AFJQ9BTM1 129 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 SLC26A6Q9BXS9 759 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 USP44Q9H0E7 712 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 TTYH1Q9H313 450 aaPredicted RBP3.48□□□□□ -1.85
USP48-215ENST00000534705 PLEKHA4Q9H4M7 779 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 C17orf75Q9HAS0 396 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 SMC4Q9NTJ3 1288 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 TBC1D22BQ9NU19 505 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 CISD1Q9NZ45 108 aaKnown RBP3.48□□□□□ -1.85
USP48-215ENST00000534705 SMARCAL1Q9NZC9 954 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 KCND2Q9NZV8 630 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 CDC14AQ9UNH5 594 aa3.48□□□□□ -1.85
USP48-215ENST00000534705 NAV1Q8NEY1 1877 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 PTPRCP08575 1304 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 PASKQ96RG2 1323 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 ATXN2Q99700 1313 aaKnown RBP3.47□□□□□ -1.85
USP48-215ENST00000534705 ZSWIM8A7E2V4 1837 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 MYH4Q9Y623 1939 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 UQCRHLA0A096LP55 91 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 ANKRD18BA2A2Z9 1011 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 GOLGA6L9A6NEM1 432 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 VGLL3A8MV65 326 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 NPIPB11E5RHQ5 1161 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 LDLRAD4O15165 306 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 PPIP5K2O43314 1243 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 ZIC3O60481 467 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 RFPL2O75678 378 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 KRT36O76013 467 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 UQCRHP07919 91 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 EDN2P20800 178 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 MAOAP21397 527 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 RRM1P23921 792 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 ELF1P32519 619 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 ABCD1P33897 745 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 EPS15P42566 896 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 ERVFC1-1P60608 527 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 NEXNQ0ZGT2 675 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 GRSF1Q12849 480 aaKnown RBP eCLIP3.47□□□□□ -1.85
USP48-215ENST00000534705 PTP4A2Q12974 167 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 G3BP1Q13283 466 aaKnown RBP eCLIP3.47□□□□□ -1.85
USP48-215ENST00000534705 ITGADQ13349 1161 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 SLC39A14Q15043 492 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 SYCP1Q15431 976 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 OASLQ15646 514 aaKnown RBP3.47□□□□□ -1.85
USP48-215ENST00000534705 EFNB3Q15768 340 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 CCDC152Q4G0S7 254 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 SGO1Q5FBB7 561 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 SPATA1Q5VX52 437 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 INO80CQ6PI98 192 aaPredicted RBP3.47□□□□□ -1.85
USP48-215ENST00000534705 CPLX2Q6PUV4 134 aaKnown RBP3.47□□□□□ -1.85
USP48-215ENST00000534705 MTSS1LQ765P7 747 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 GPC2Q8N158 579 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 OR8H2Q8N162 312 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 PGBD5Q8N414 524 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 RFLNBQ8N5W9 214 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 HVCN1Q96D96 273 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 RNF125Q96EQ8 232 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 BBS4Q96RK4 519 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 SH3GL2Q99962 352 aa3.47□□□□□ -1.85
USP48-215ENST00000534705 LBHD1Q9BQE6 289 aaPredicted RBP3.47□□□□□ -1.85
USP48-215ENST00000534705 NUDT16L1Q9BRJ7 211 aaKnown RBP3.47□□□□□ -1.85
USP48-215ENST00000534705 NUF2Q9BZD4 464 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms