RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 ZDHHC3Q9NYG2 299 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 RIMKLBQ9ULI2 386 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 MAD1L1Q9Y6D9 718 aa13.81□□□□□ -0.2
VPS11-205ENST00000534551 IGLV3-16A0A075B6K0 115 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 FAM149AA5PLN7 773 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 A6NCN8 305 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 PRR19A6NJB7 356 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 DKK1O94907 266 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 MLNP12872 115 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 ZNF7P17097 686 aaPredicted RBP13.8□□□□□ -0.2
VPS11-205ENST00000534551 ACP1P24666 158 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 DRG2P55039 364 aaKnown RBP13.8□□□□□ -0.2
VPS11-205ENST00000534551 SARNPP82979 210 aaKnown RBP13.8□□□□□ -0.2
VPS11-205ENST00000534551 LRP8Q14114 963 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 HLTFQ14527 1009 aaKnown RBP eCLIP13.8□□□□□ -0.2
VPS11-205ENST00000534551 FASTKD3Q14CZ7 662 aaKnown RBP13.8□□□□□ -0.2
VPS11-205ENST00000534551 BBS9Q3SYG4 887 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 GPR33Q49SQ1 333 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 C14orf28Q4W4Y0 310 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 HOOK3Q86VS8 718 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 CHCHD4Q8N4Q1 142 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 OTUD6BQ8N6M0 293 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 LRRN4CLQ8ND94 238 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 GPR156Q8NFN8 814 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 OR4L1Q8NH43 312 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 SLC37A2Q8TED4 501 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 DCUN1D1Q96GG9 259 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 SIGLEC10Q96LC7 697 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 TTC25Q96NG3 672 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 C19orf43Q9BQ61 176 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 TIMM29Q9BSF4 260 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 SYNDIG1Q9H7V2 258 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 CATSPERZQ9NTU4 200 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 GRHL1Q9NZI5 618 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 SCHIP1Q9P0W5 487 aaPredicted RBP13.8□□□□□ -0.2
VPS11-205ENST00000534551 SAMD15Q9P1V8 674 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 SLC17A6Q9P2U8 582 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 CHMP2BQ9UQN3 213 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 RNF215Q9Y6U7 377 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 FRYQ5TBA9 3013 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 AKAP13Q12802 2813 aa13.8□□□□□ -0.2
VPS11-205ENST00000534551 WDFY3Q8IZQ1 3526 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 PRAMEF33A0A0G2JMD5 474 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 ESYT3A0FGR9 886 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 FAM187AA6NFU0 413 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 GPR89AB7ZAQ6 455 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 KIF2AO00139 706 aaPredicted RBP13.79□□□□□ -0.2
VPS11-205ENST00000534551 KMOO15229 486 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 POP7O75817 140 aaKnown RBP13.79□□□□□ -0.2
VPS11-205ENST00000534551 VAPBO95292 243 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 ADRB1P08588 477 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 GPR89BP0CG08 455 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 ITGB6P18564 788 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 RPL10P27635 214 aaKnown RBP13.79□□□□□ -0.2
VPS11-205ENST00000534551 PRLHRP49683 370 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 MORF4L2Q15014 288 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 ANKRD20A4Q4UJ75 823 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 DUS1LQ6P1R4 473 aaKnown RBP13.79□□□□□ -0.2
VPS11-205ENST00000534551 LVRNQ6Q4G3 990 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 NAPRTQ6XQN6 538 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 SDR16C5Q8N3Y7 309 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 KIF18AQ8NI77 898 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 SCG3Q8WXD2 468 aaKnown RBP13.79□□□□□ -0.2
VPS11-205ENST00000534551 STAMBPL1Q96FJ0 436 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 CFAP36Q96G28 342 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 CCDC3Q9BQI4 270 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 LRRC1Q9BTT6 524 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 PLAC1Q9HBJ0 212 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 KLK13Q9UKR3 277 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 PADI4Q9UM07 663 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 APOBEC2Q9Y235 224 aaKnown RBP13.79□□□□□ -0.2
VPS11-205ENST00000534551 WDR37Q9Y2I8 494 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 RPS6KL1Q9Y6S9 549 aa13.79□□□□□ -0.2
VPS11-205ENST00000534551 ADAMTS20P59510 1910 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 ZCWPW2A0A1B0GU75 182 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 EME2A4GXA9 379 aaPredicted RBP13.78□□□□□ -0.2
VPS11-205ENST00000534551 SDR42E2A6NKP2 422 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 OR52A4PA6NMU1 304 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 PDZK1P1A8MUH7 402 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 AP3B1O00203 1094 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 ATP1B2P14415 290 aaPredicted RBP13.78□□□□□ -0.2
VPS11-205ENST00000534551 BRAFP15056 766 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 PMLP29590 882 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 ARCN1P48444 511 aaKnown RBP13.78□□□□□ -0.2
VPS11-205ENST00000534551 INSM1Q01101 510 aaPredicted RBP13.78□□□□□ -0.2
VPS11-205ENST00000534551 LAMB3Q13751 1172 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 BCL7AQ4VC05 210 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 FASTKD1Q53R41 847 aaKnown RBP13.78□□□□□ -0.2
VPS11-205ENST00000534551 HES3Q5TGS1 186 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 DUPD1Q68J44 220 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 KIAA0930Q6ICG6 404 aaPredicted RBP13.78□□□□□ -0.2
VPS11-205ENST00000534551 C8orf74Q6P047 294 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 OGFOD3Q6PK18 319 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 NLRP9Q7RTR0 991 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 RAB44Q7Z6P3 723 aaPredicted RBP13.78□□□□□ -0.2
VPS11-205ENST00000534551 PCGF5Q86SE9 256 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 ANKMY2Q8IV38 441 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 ARL14Q8N4G2 192 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 GPR150Q8NGU9 434 aa13.78□□□□□ -0.2
VPS11-205ENST00000534551 ADAMTS14Q8WXS8 1223 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms