RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	TRPV2	Q9Y5S1	764 aa		4.66	□□□□□ -1.66
ECHDC1-223	ENST00000534442	PRRC2A	P48634	2157 aa	Known RBP	4.65	□□□□□ -1.66
ECHDC1-223	ENST00000534442	TTC34	A8MYJ7	566 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	DSCR3	O14972	297 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SYN3	O14994	580 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CNTN5	O94779	1100 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	NDUFB10	O96000	172 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	LGALS2	P05162	132 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GALT	P07902	379 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SLC3A2	P08195	630 aa	Known RBP	4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	PKM	P14618	531 aa	Known RBP	4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	MAK	P20794	623 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ADORA1	P30542	326 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	PAFAH1B1	P43034	410 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GPD2	P43304	727 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	POLD2	P49005	469 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ACADVL	P49748	655 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RARRES1	P49788	294 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RPS6KA3	P51812	740 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ADPRH	P54922	357 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CDH15	P55291	814 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SEMA3A	Q14563	771 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	NAA25	Q14CX7	972 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	LARS2	Q15031	903 aa	Known RBP	4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ERCC6L	Q2NKX8	1250 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	HLA-B	Q31612	363 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	C14orf28	Q4W4Y0	310 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	AWAT1	Q58HT5	328 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	PPM1L	Q5SGD2	360 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	LIN9	Q5TKA1	542 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SPATA1	Q5VX52	437 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ITPRIPL1	Q6GPH6	555 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	NAA16	Q6N069	864 aa	Predicted RBP	4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	DCDC5	Q6ZRR9	648 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TMTC3	Q6ZXV5	915 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	G2E3	Q7L622	706 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RNF144B	Q7Z419	303 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	MDGA2	Q7Z553	956 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ADGRG6	Q86SQ4	1221 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	MFSD6L	Q8IWD5	586 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	BRSK2	Q8IWQ3	736 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ZNF366	Q8N895	744 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ADPRHL1	Q8NDY3	354 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RFWD2	Q8NHY2	731 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	NFKBID	Q8NI38	313 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	C9orf43	Q8TAL5	461 aa	Predicted RBP	4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	HTR3C	Q8WXA8	447 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TMEM158	Q8WZ71	300 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	REPS1	Q96D71	796 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	HS6ST2	Q96MM7	605 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CD180	Q99467	661 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TREX2	Q9BQ50	279 aa	Predicted RBP	4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	MRPL9	Q9BYD2	267 aa	Known RBP	4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TRIM31	Q9BZY9	425 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	FAM49A	Q9H0Q0	323 aa	Predicted RBP	4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	BEX4	Q9NWD9	120 aa	Predicted RBP	4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SUFU	Q9UMX1	484 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	PKP3	Q9Y446	797 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RPS6KL1	Q9Y6S9	549 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CEP192	Q8TEP8	1941 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CNTNAP2	Q9UHC6	1331 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	KDM3A	Q9Y4C1	1321 aa		4.65	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GREB1L	Q9C091	1923 aa	Predicted RBP	4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	BAZ2B	Q9UIF8	2168 aa	Known RBP	4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	PKDREJ	Q9NTG1	2253 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GOLGA6L10	A0A0M3HER8	536 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	HEPACAM2	A8MVW5	462 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442		M0QZ92	97 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CHAD	O15335	359 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	MSI1	O43347	362 aa	Known RBP	4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	DOK2	O60496	412 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	CYP4B1	P13584	511 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GNS	P15586	552 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	IDUA	P35475	653 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	MTNR1A	P48039	350 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SLC11A1	P49279	550 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RARS	P54136	660 aa	Known RBP	4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SNAP25	P60880	206 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	HOXA4	Q00056	320 aa	Predicted RBP	4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	KLRB1	Q12918	225 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	BYSL	Q13895	437 aa	Known RBP	4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	KCNB1	Q14721	858 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TOMM20	Q15388	145 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	AP5B1	Q2VPB7	878 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	RABL6	Q3YEC7	729 aa	Predicted RBP	4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GXYLT1	Q4G148	440 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	HECTD2	Q5U5R9	776 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SNX30	Q5VWJ9	437 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TMEM65	Q6PI78	240 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TRIM72	Q6ZMU5	477 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	B4GALNT4	Q76KP1	1039 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	ZNF627	Q7L945	461 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	SLC29A4	Q7RTT9	530 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TFAP2D	Q7Z6R9	452 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	GALNT7	Q86SF2	657 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	MON1A	Q86VX9	555 aa		4.64	□□□□□ -1.67
ECHDC1-223	ENST00000534442	TMEM200A	Q86VY9	491 aa		4.64	□□□□□ -1.67

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