RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 RAD9BQ6WBX8 426 aa15.2■□□□□ 0.02
CPSF1-211ENST00000533492 TMEM26Q6ZUK4 368 aa15.2■□□□□ 0.02
CPSF1-211ENST00000533492 ARHGAP22Q7Z5H3 698 aa15.2■□□□□ 0.02
CPSF1-211ENST00000533492 ZNF547Q8IVP9 402 aa15.2■□□□□ 0.02
CPSF1-211ENST00000533492 ZNF843Q8N446 348 aa15.2■□□□□ 0.02
CPSF1-211ENST00000533492 IL22RA1Q8N6P7 574 aa15.2■□□□□ 0.02
CPSF1-211ENST00000533492 ACRBPQ8NEB7 543 aa15.2■□□□□ 0.02
CPSF1-211ENST00000533492 CXorf40BQ96DE9 158 aa15.2■□□□□ 0.02
CPSF1-211ENST00000533492 FICDQ9BVA6 458 aa15.2■□□□□ 0.02
CPSF1-211ENST00000533492 LACRTQ9GZZ8 138 aa15.2■□□□□ 0.02
CPSF1-211ENST00000533492 UCK1Q9HA47 277 aa15.2■□□□□ 0.02
CPSF1-211ENST00000533492 UGT1A7Q9HAW7 530 aa15.2■□□□□ 0.02
CPSF1-211ENST00000533492 UGT1A10Q9HAW8 530 aa15.2■□□□□ 0.02
CPSF1-211ENST00000533492 UGT1A8Q9HAW9 530 aa15.2■□□□□ 0.02
CPSF1-211ENST00000533492 ZNF624Q9P2J8 865 aaPredicted RBP15.2■□□□□ 0.02
CPSF1-211ENST00000533492 TRIM10Q9UDY6 481 aa15.2■□□□□ 0.02
CPSF1-211ENST00000533492 AMFRQ9UKV5 643 aa15.2■□□□□ 0.02
CPSF1-211ENST00000533492 AAR2Q9Y312 384 aaKnown RBP15.2■□□□□ 0.02
CPSF1-211ENST00000533492 C2orf81A6NN90 581 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 KCNN4O15554 427 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 PJA2O43164 708 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 KCNJ13O60928 360 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 UBXN7O94888 489 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 TYRP1P17643 537 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 PTPN7P35236 360 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 HALP42357 657 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 DRG2P55039 364 aaKnown RBP15.19■□□□□ 0.02
CPSF1-211ENST00000533492 ANKRD20A2Q5SQ80 823 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 ANKRD20A1Q5TYW2 823 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 ANKRD20A3Q5VUR7 823 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 ANKS6Q68DC2 871 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 ABRAXAS1Q6UWZ7 409 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 CEACAM20Q6UY09 585 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 WASH2PQ6VEQ5 465 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 ZNF605Q86T29 641 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 AMZ2Q86W34 360 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 TXLNBQ8N3L3 684 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 ZNF398Q8TD17 642 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 PMEPA1Q969W9 287 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 LRRC45Q96CN5 670 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 TEFMQ96QE5 360 aaKnown RBP15.19■□□□□ 0.02
CPSF1-211ENST00000533492 BAG1Q99933 345 aaPredicted RBP15.19■□□□□ 0.02
CPSF1-211ENST00000533492 ARHGAP9Q9BRR9 750 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 WASH6PQ9NQA3 447 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 POT1Q9NUX5 634 aa15.19■□□□□ 0.02
CPSF1-211ENST00000533492 REXO2Q9Y3B8 237 aaKnown RBP15.19■□□□□ 0.02
CPSF1-211ENST00000533492 SDK2Q58EX2 2172 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 GOLGA6L9A6NEM1 432 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 C5orf60A6NFR6 353 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 KALRNO60229 2985 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 POP7O75817 140 aaKnown RBP15.18■□□□□ 0.02
CPSF1-211ENST00000533492 PYGMP11217 842 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 MSH3P20585 1137 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 LPOP22079 712 aaPredicted RBP15.18■□□□□ 0.02
CPSF1-211ENST00000533492 PSMB4P28070 264 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 AKT1P31749 480 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 ARSDP51689 593 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 MC2RQ01718 297 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 KIF5AQ12840 1032 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 AGAP9Q5VTM2 703 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 TMEM220Q6QAJ8 160 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 RANBP10Q6VN20 620 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 PEX26Q7Z412 305 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 RBM12BQ8IXT5 1001 aaKnown RBP15.18■□□□□ 0.02
CPSF1-211ENST00000533492 UBL4BQ8N7F7 174 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 BMPERQ8N8U9 685 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 RASGEF1AQ8N9B8 481 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 DDHD1Q8NEL9 900 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 NKD1Q969G9 470 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 PPP1R2P1Q96PQ5 205 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 CTRCQ99895 268 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 FAM118BQ9BPY3 351 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 APOL2Q9BQE5 337 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 FBXO8Q9NRD0 319 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 PCDHGA4Q9Y5G9 962 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 ARL5AQ9Y689 179 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 DNMT3AQ9Y6K1 912 aaPredicted RBP15.18■□□□□ 0.02
CPSF1-211ENST00000533492 ATMQ13315 3056 aa15.18■□□□□ 0.02
CPSF1-211ENST00000533492 GRID2IPA4D2P6 1211 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 OR52A4PA6NMU1 304 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 POLR1CO15160 346 aaPredicted RBP15.17■□□□□ 0.02
CPSF1-211ENST00000533492 GPR39O43194 453 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 ZNF189O75820 626 aaPredicted RBP15.17■□□□□ 0.02
CPSF1-211ENST00000533492 BRAFP15056 766 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 PTPRCAPQ14761 206 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 TAF1AQ15573 450 aaPredicted RBP15.17■□□□□ 0.02
CPSF1-211ENST00000533492 LONRF2Q1L5Z9 754 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 GPRC6AQ5T6X5 926 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 AADACL2Q6P093 401 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 C11orf96Q7Z7L8 435 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 CACNA2D3Q8IZS8 1091 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 SYCE1Q8N0S2 351 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 LRRC57Q8N9N7 239 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 OR4K2Q8NGD2 314 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 CCDC110Q8TBZ0 833 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 ALG3Q92685 438 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 MED8Q96G25 268 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 SPATA13Q96N96 652 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 TGM7Q96PF1 710 aa15.17■□□□□ 0.02
CPSF1-211ENST00000533492 ZPBPQ9BS86 351 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms