RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 KIFC1Q9BW19 673 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.29□□□□□ -0.44
RAD50-209ENST00000533482 IMP3Q9NV31 184 aaKnown RBP12.29□□□□□ -0.44
RAD50-209ENST00000533482 CACNA2D2Q9NY47 1150 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 TBC1D30Q9Y2I9 924 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 GPSM3Q9Y4H4 160 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 A0A1B0GUL6 1792 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 ALDH1A2O94788 518 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 DLGAP3O95886 979 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 RRM2P31350 389 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 COL9A2Q14055 689 aaPredicted RBP12.29□□□□□ -0.44
RAD50-209ENST00000533482 SFT2D3Q587I9 215 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 TTC23Q5W5X9 447 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 CEP97Q8IW35 865 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 ZC3H7AQ8IWR0 971 aaKnown RBP12.29□□□□□ -0.44
RAD50-209ENST00000533482 SFRP1Q8N474 314 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 OR10A6Q8NH74 314 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 MAGEB10Q96LZ2 347 aaPredicted RBP12.29□□□□□ -0.44
RAD50-209ENST00000533482 FAM83DQ9H4H8 585 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 LRTM1Q9HBL6 345 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 DUSP12Q9UNI6 340 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 LOC100506127A0A0U1RQW1 187 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 MBLAC1A4D2B0 266 aaPredicted RBP12.29□□□□□ -0.44
RAD50-209ENST00000533482 ZNF623O75123 536 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 DDX5P17844 614 aaKnown RBP12.29□□□□□ -0.44
RAD50-209ENST00000533482 IMPDH1P20839 514 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 PRDX6P30041 224 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 SPAM1P38567 509 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 GDF5P43026 501 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 DCTN2Q13561 401 aaKnown RBP12.29□□□□□ -0.44
RAD50-209ENST00000533482 ADGRE1Q14246 886 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 MORN1Q5T089 497 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 Q6ZVU0 165 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 ARHGAP22Q7Z5H3 698 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 BBS7Q8IWZ6 715 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 ZCCHC7Q8N3Z6 543 aaKnown RBP12.29□□□□□ -0.44
RAD50-209ENST00000533482 COMMD3-BMI1R4GMX3 469 aa12.29□□□□□ -0.44
RAD50-209ENST00000533482 CYBAP13498 195 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 SERPINB1P30740 379 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 MAT2AP31153 395 aaKnown RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 MRPS15P82914 257 aaKnown RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 SLC22A17Q8WUG5 538 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 PKP2Q99959 881 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 MRPS26Q9BYN8 205 aaKnown RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 C6orf62Q9GZU0 229 aaPredicted RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 ADPRHL2Q9NX46 363 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 H2AFY2Q9P0M6 372 aaPredicted RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 PGAP2Q9UHJ9 254 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 SAMHD1Q9Y3Z3 626 aaKnown RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 WNT6Q9Y6F9 365 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 KCNE2Q9Y6J6 123 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 DDX60Q8IY21 1712 aaKnown RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 LRP5O75197 1615 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 TBC1D3DA0A087WVF3 549 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 TBC1D3IA0A087WXS9 549 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 TBC1D3EA0A087X179 549 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 TBC1D3KA0A087X1G2 549 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 A0A0U1RQS6 177 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 TBC1D3FA6NER0 549 aaPredicted RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 LRRC14BA6NHZ5 514 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 TBC1D3LB9A6J9 549 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 TBC1D3HP0C7X1 549 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 ETV4P43268 484 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 DGKQP52824 942 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 XIAPP98170 497 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 ILF2Q12905 390 aaKnown RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 TBC1D3GQ6DHY5 549 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 TBC1D3CQ6IPX1 549 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 TMEM135Q86UB9 458 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 RAVER1Q8IY67 606 aaKnown RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 KIAA2013Q8IYS2 634 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 TBC1D3Q8IZP1 549 aaPredicted RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 PPP1R16AQ96I34 528 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 ARIH1Q9Y4X5 557 aaPredicted RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 SMCHD1A6NHR9 2005 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 AURKAO14965 403 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 INPPL1O15357 1258 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 CNOT3O75175 753 aaKnown RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 ECI2O75521 394 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 ERAL1O75616 437 aaKnown RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 SERPINI2O75830 405 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 CLTBP09497 229 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 EPORP19235 508 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 TMED10P49755 219 aaKnown RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 C21orf59P57076 290 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 HERVK_113P63132 956 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 ITGADQ13349 1161 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 DPYSQ14117 519 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 FAM174BQ3ZCQ3 159 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 PSRC1Q6PGN9 363 aaPredicted RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 ASRGL1Q7L266 308 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 C8orf48Q96LL4 319 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 SLC2A13Q96QE2 648 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 CCDC3Q9BQI4 270 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 ERVK-6Q9BXR3 956 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 RSL24D1Q9UHA3 163 aaKnown RBP12.28□□□□□ -0.44
RAD50-209ENST00000533482 C3orf18Q9UK00 162 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 ACTL7AQ9Y615 435 aa12.28□□□□□ -0.44
RAD50-209ENST00000533482 LIN7AO14910 233 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms