RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 ACP5P13686 325 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 BRAFP15056 766 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 TPSB2P20231 275 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 ITGALP20701 1170 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 IDSP22304 550 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 EIF2S3P41091 472 aaKnown RBP9.68□□□□□ -0.86
NUP98-220ENST00000533346 LIMK2P53671 638 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 INHBCP55103 352 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 ITIH4Q14624 930 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 PTPRCAPQ14761 206 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 TPSAB1Q15661 275 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 TBC1D25Q3MII6 688 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 ZNF658BQ4V348 819 aaPredicted RBP9.68□□□□□ -0.86
NUP98-220ENST00000533346 ZNF648Q5T619 568 aaPredicted RBP9.68□□□□□ -0.86
NUP98-220ENST00000533346 METRNLQ641Q3 311 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 TMEM71Q6P5X7 295 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 TMEM220Q6QAJ8 160 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 WDR74Q6RFH5 385 aaPredicted RBP9.68□□□□□ -0.86
NUP98-220ENST00000533346 ZNF574Q6ZN55 896 aaPredicted RBP9.68□□□□□ -0.86
NUP98-220ENST00000533346 PIM3Q86V86 326 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 AMZ2Q86W34 360 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 NXPE1Q8N323 547 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 BEND7Q8N7W2 519 aaPredicted RBP9.68□□□□□ -0.86
NUP98-220ENST00000533346 CCDC89Q8N998 374 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 GLIS1Q8NBF1 620 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 OR4D9Q8NGE8 314 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 OR52K1Q8NGK4 314 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 OR2L2Q8NH16 312 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 PATE1Q8WXA2 126 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 FGF11Q92914 225 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 RAB33BQ9H082 229 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 STN1Q9H668 368 aaKnown RBP9.68□□□□□ -0.86
NUP98-220ENST00000533346 ASCL3Q9NQ33 180 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 RAB6BQ9NRW1 208 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 POT1Q9NUX5 634 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 ZDHHC3Q9NYG2 299 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 ZNF624Q9P2J8 865 aaPredicted RBP9.68□□□□□ -0.86
NUP98-220ENST00000533346 SNX12Q9UMY4 172 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 KCNK6Q9Y257 313 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 PRKAB1Q9Y478 270 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 PCDHGA7Q9Y5G6 932 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 PKD1L2Q7Z442 2459 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 ADAMTS20P59510 1910 aa9.68□□□□□ -0.86
NUP98-220ENST00000533346 GCN1Q92616 2671 aaKnown RBP9.68□□□□□ -0.86
NUP98-220ENST00000533346 QSOX1O00391 747 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 CASC3O15234 703 aaKnown RBP9.67□□□□□ -0.86
NUP98-220ENST00000533346 KIF5CO60282 957 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 BRINP1O60477 761 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 MTX2O75431 263 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 POP7O75817 140 aaKnown RBP9.67□□□□□ -0.86
NUP98-220ENST00000533346 GAS8O95995 478 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 IFNB1P01574 187 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 SLC4A1P02730 911 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 ITGA2BP08514 1039 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 RALBP11234 206 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 ETS1P14921 441 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 TCP1P17987 556 aaKnown RBP9.67□□□□□ -0.86
NUP98-220ENST00000533346 MSH3P20585 1137 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 ACRV1P26436 265 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 MC4RP32245 332 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 CXCR5P32302 372 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 SLC19A1P41440 591 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 NPY2RP49146 381 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 PRLHRP49683 370 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 CTSCP53634 463 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 HHEXQ03014 270 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 CFHR1Q03591 330 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 CACNG1Q06432 222 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 SNX1Q13596 522 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 TCEA2Q15560 299 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 INSCQ1MX18 579 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 PCID2Q5JVF3 399 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 TSTD2Q5T7W7 516 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 PAPD7Q5XG87 772 aaKnown RBP9.67□□□□□ -0.86
NUP98-220ENST00000533346 XKR5Q6UX68 686 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 PACS1Q6VY07 963 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 TMPRSS9Q7Z410 1059 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 SLC35F6Q8N357 371 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 OR13J1Q8NGT2 312 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 SLCO2A1Q92959 643 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 ATXN7L3BQ96GX2 97 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 OSBPL9Q96SU4 736 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 COPS8Q99627 209 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 STRADBQ9C0K7 418 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 MRM3Q9HC36 420 aaKnown RBP9.67□□□□□ -0.86
NUP98-220ENST00000533346 ARFGAP3Q9NP61 516 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 PRDM8Q9NQV8 689 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 SCHIP1Q9P0W5 487 aaPredicted RBP9.67□□□□□ -0.86
NUP98-220ENST00000533346 CPNE7Q9UBL6 633 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 ACSL5Q9ULC5 683 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 AK5Q9Y6K8 562 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 SLC30A1Q9Y6M5 507 aa9.67□□□□□ -0.86
NUP98-220ENST00000533346 CFAP99D6REC4 459 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 E7EVH7 732 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 PGRMC1O00264 195 aaKnown RBP9.66□□□□□ -0.86
NUP98-220ENST00000533346 NVLO15381 856 aaKnown RBP9.66□□□□□ -0.86
NUP98-220ENST00000533346 TOX3O15405 576 aaPredicted RBP9.66□□□□□ -0.86
NUP98-220ENST00000533346 GPR39O43194 453 aa9.66□□□□□ -0.86
NUP98-220ENST00000533346 TLX3O43711 291 aaPredicted RBP9.66□□□□□ -0.86
NUP98-220ENST00000533346 AP2A2O94973 939 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms