RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 GSRP00390 522 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 JCHAINP01591 159 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 MYBL2P10244 700 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 KELP23276 732 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 VARSP26640 1264 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 GRNP28799 593 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 SUOXP51687 545 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 PLTPP55058 493 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 WASHC5Q12768 1159 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 MTM1Q13496 603 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 MYLK3Q32MK0 819 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 P3H1Q32P28 736 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 PARP15Q460N3 678 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 TMEM52BQ4KMG9 183 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 ATP1A1-AS1Q5TC04 95 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 C4orf22Q6V702 233 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 GDPD4Q6W3E5 623 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 C17orf82Q86X59 251 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 TAB3Q8N5C8 712 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 ATPAF2Q8N5M1 289 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 ESX1Q8N693 406 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 EIF1ADQ8N9N8 165 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 OR2AP1Q8NGE2 309 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 ARHGEF2Q92974 986 aaKnown RBP11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 SNF8Q96H20 258 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 MAGEH1Q9H213 219 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 PAK5Q9P286 719 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 ANAPC5Q9UJX4 755 aa11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 TMEM184BQ9Y519 407 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC4-213ENST00000533149 ESPL1Q14674 2120 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 LRP4O75096 1905 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 TCP11X1B4DZS4 312 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 J3KR12 359 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 DNALI1O14645 258 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 STK17BO94768 372 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 LDLRP01130 860 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 H2AFXP16104 143 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 XPAP23025 273 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 PTPN3P26045 913 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 ETFBP38117 255 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 STAT5AP42229 794 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 ITGA8P53708 1063 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 PMS2P54278 862 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 MAZP56270 477 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 KIAA1024LP59773 190 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 MC2RQ01718 297 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 GNA12Q03113 381 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 RAD51Q06609 339 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 ELP6Q0PNE2 266 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 CALCOCO2Q13137 446 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 MAP7Q14244 749 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 AGERQ15109 404 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 LRRC73Q5JTD7 316 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 ANKRD20A2Q5SQ80 823 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 ANKRD20A1Q5TYW2 823 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 ANKRD20A3Q5VUR7 823 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 IZUMO3Q5VZ72 239 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 TIGD7Q6NT04 549 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 TMEM71Q6P5X7 295 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 ZDHHC24Q6UX98 284 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 PID1Q7Z2X4 250 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 ZNF354CQ86Y25 554 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 GSPT2Q8IYD1 628 aaKnown RBP11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 ZNF567Q8N184 647 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 BMPERQ8N8U9 685 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 BBOF1Q8ND07 529 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 OR1E3Q8WZA6 343 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 ANKRD7Q92527 254 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 SPATA13Q96N96 652 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 CEP41Q9BYV8 373 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 TMEM168Q9H0V1 697 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 FBXO8Q9NRD0 319 aa11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 ERRFI1Q9UJM3 462 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC4-213ENST00000533149 CCDC151A5D8V7 595 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 HNRNPRO43390 633 aaKnown RBP11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 KDELR3O43731 214 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 ERLIN1O75477 346 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 SEC31AO94979 1220 aaKnown RBP11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 METTL18O95568 372 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 PEX11BO96011 259 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 PCCBP05166 539 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 CCNB1P14635 433 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 ECHS1P30084 290 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 IFI35P80217 286 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 CAV1Q03135 178 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 ZBTB17Q13105 803 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 PEX6Q13608 980 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 PARP6Q2NL67 630 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 TEX44Q53QW1 395 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 NKAIN2Q5VXU1 208 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 KCTD16Q68DU8 428 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 FBXO38Q6PIJ6 1188 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 ARHGEF18Q6ZSZ5 1173 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 ZDHHC1Q8WTX9 485 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 MAML1Q92585 1016 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 TEKT5Q96M29 485 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 C5orf34Q96MH7 638 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 VAT1Q99536 393 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms