RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 PDZK1P1A8MUH7 402 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 KCNK1O00180 336 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 JCHAINP01591 159 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 SLC4A1P02730 911 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 CYP1A2P05177 515 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 CCNYL3P0C7X3 344 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 GNLYP22749 145 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 CAPZBP47756 277 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 PPP1CAP62136 330 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 GPR18Q14330 331 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.02■□□□□ 0.32
PKP3-208ENST00000531857 KHDC1Q4VXA5 237 aaKnown RBP17.02■□□□□ 0.32
PKP3-208ENST00000531857 PRSS42Q7Z5A4 293 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 CNTD1Q8N815 330 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 TC2NQ8N9U0 490 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 GLYATL1Q969I3 302 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 AKIRIN1Q9H9L7 192 aaPredicted RBP17.02■□□□□ 0.32
PKP3-208ENST00000531857 ZFYVE1Q9HBF4 777 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 LHX9Q9NQ69 397 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 HAUS2Q9NVX0 235 aa17.02■□□□□ 0.32
PKP3-208ENST00000531857 RP1L1Q8IWN7 2480 aaPredicted RBP17.02■□□□□ 0.31
PKP3-208ENST00000531857 KMOO15229 486 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 MFAP3LO75121 409 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 DRG2P55039 364 aaKnown RBP17.01■□□□□ 0.31
PKP3-208ENST00000531857 ZBTB17Q13105 803 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 SEMA5AQ13591 1074 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 HADHQ16836 314 aaKnown RBP17.01■□□□□ 0.31
PKP3-208ENST00000531857 CAPRIN2Q6IMN6 1127 aaKnown RBP17.01■□□□□ 0.31
PKP3-208ENST00000531857 IRGCQ6NXR0 463 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 ABRAXAS1Q6UWZ7 409 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 TMC3Q7Z5M5 1100 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 LRRTM4Q86VH4 590 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 PPP1R3BQ86XI6 285 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 APLFQ8IW19 511 aaPredicted RBP17.01■□□□□ 0.31
PKP3-208ENST00000531857 TRAM1L1Q8N609 369 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 KCTD6Q8NC69 237 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 CCNYQ8ND76 341 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 HDAC11Q96DB2 347 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 TRIB3Q96RU7 358 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 ZNF670Q9BS34 389 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 ZSCAN5AQ9BUG6 496 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 ADGRE3Q9BY15 652 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 ACTL8Q9H568 366 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 POT1Q9NUX5 634 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 ZNHIT6Q9NWK9 470 aaKnown RBP17.01■□□□□ 0.31
PKP3-208ENST00000531857 TRIM10Q9UDY6 481 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 LUC7L2Q9Y383 392 aaKnown RBP17.01■□□□□ 0.31
PKP3-208ENST00000531857 UNC79Q9P2D8 2635 aa17.01■□□□□ 0.31
PKP3-208ENST00000531857 ESPL1Q14674 2120 aa17■□□□□ 0.31
PKP3-208ENST00000531857 TTLL8A6PVC2 850 aa17■□□□□ 0.31
PKP3-208ENST00000531857 GPR89AB7ZAQ6 455 aa17■□□□□ 0.31
PKP3-208ENST00000531857 MYO1FO00160 1098 aa17■□□□□ 0.31
PKP3-208ENST00000531857 GPR89BP0CG08 455 aa17■□□□□ 0.31
PKP3-208ENST00000531857 NELFEP18615 380 aaKnown RBP17■□□□□ 0.31
PKP3-208ENST00000531857 CASP14P31944 242 aa17■□□□□ 0.31
PKP3-208ENST00000531857 TAS2R40P59535 323 aa17■□□□□ 0.31
PKP3-208ENST00000531857 DCDC1P59894 354 aa17■□□□□ 0.31
PKP3-208ENST00000531857 RPS18P62269 152 aaKnown RBP17■□□□□ 0.31
PKP3-208ENST00000531857 KCNAB1Q14722 419 aa17■□□□□ 0.31
PKP3-208ENST00000531857 PWWP2BQ6NUJ5 590 aa17■□□□□ 0.31
PKP3-208ENST00000531857 FAM199XQ6PEV8 388 aaPredicted RBP17■□□□□ 0.31
PKP3-208ENST00000531857 OR8K1Q8NGG5 319 aa17■□□□□ 0.31
PKP3-208ENST00000531857 FAF2Q96CS3 445 aa17■□□□□ 0.31
PKP3-208ENST00000531857 ZDHHC12Q96GR4 267 aa17■□□□□ 0.31
PKP3-208ENST00000531857 TIMM29Q9BSF4 260 aa17■□□□□ 0.31
PKP3-208ENST00000531857 CEP41Q9BYV8 373 aa17■□□□□ 0.31
PKP3-208ENST00000531857 PLEKHB1Q9UF11 243 aaPredicted RBP17■□□□□ 0.31
PKP3-208ENST00000531857 TMPRSS11EQ9UL52 423 aa17■□□□□ 0.31
PKP3-208ENST00000531857 CAPN11Q9UMQ6 739 aa17■□□□□ 0.31
PKP3-208ENST00000531857 WDR37Q9Y2I8 494 aa17■□□□□ 0.31
PKP3-208ENST00000531857 PRRC2CQ9Y520 2896 aaKnown RBP17■□□□□ 0.31
PKP3-208ENST00000531857 A0A087X0T9 212 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 IGHV5-51A0A0C4DH38 117 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 VPS4BO75351 444 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 AGFG2O95081 481 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 RECKO95980 971 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 MT-ND3P03897 115 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 FAM228BP0C875 321 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 FOLR1P15328 257 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 BPIP17213 487 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 MX2P20592 715 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 PDK2Q15119 407 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 AGAP9Q5VTM2 703 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 CPZQ66K79 652 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 WASH2PQ6VEQ5 465 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 CERS6Q6ZMG9 384 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 C11orf96Q7Z7L8 435 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 CPT1CQ8TCG5 803 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 CXorf40BQ96DE9 158 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 RAB33BQ9H082 229 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 MAGEE1Q9HCI5 957 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 WASH6PQ9NQA3 447 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 NFKBIL1Q9UBC1 381 aaPredicted RBP16.99■□□□□ 0.31
PKP3-208ENST00000531857 EPHA6Q9UF33 1036 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 VPS4AQ9UN37 437 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 ZNF711Q9Y462 761 aa16.99■□□□□ 0.31
PKP3-208ENST00000531857 CACNA1DQ01668 2161 aa16.98■□□□□ 0.31
PKP3-208ENST00000531857 C21orf140B9A014 251 aa16.98■□□□□ 0.31
PKP3-208ENST00000531857 AURKAO14965 403 aa16.98■□□□□ 0.31
PKP3-208ENST00000531857 VEGFDO43915 354 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms