RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 AARS2Q5JTZ9 985 aaKnown RBP14.26□□□□□ -0.13
CPSF1-206ENST00000531480 C6orf132Q5T0Z8 1188 aa14.26□□□□□ -0.13
CPSF1-206ENST00000531480 ZCCHC8Q6NZY4 707 aaKnown RBP14.26□□□□□ -0.13
CPSF1-206ENST00000531480 CASC4Q6P4E1 433 aa14.26□□□□□ -0.13
CPSF1-206ENST00000531480 XKR5Q6UX68 686 aa14.26□□□□□ -0.13
CPSF1-206ENST00000531480 MARK2Q7KZI7 788 aaKnown RBP14.26□□□□□ -0.13
CPSF1-206ENST00000531480 LMNTD2Q8IXW0 634 aa14.26□□□□□ -0.13
CPSF1-206ENST00000531480 OR6P1Q8NGX9 317 aa14.26□□□□□ -0.13
CPSF1-206ENST00000531480 GDAP1Q8TB36 358 aa14.26□□□□□ -0.13
CPSF1-206ENST00000531480 RHBDD1Q8TEB9 315 aa14.26□□□□□ -0.13
CPSF1-206ENST00000531480 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.26□□□□□ -0.13
CPSF1-206ENST00000531480 ZNF669Q96BR6 464 aaPredicted RBP14.26□□□□□ -0.13
CPSF1-206ENST00000531480 CAMK1GQ96NX5 476 aa14.26□□□□□ -0.13
CPSF1-206ENST00000531480 CDC6Q99741 560 aa14.26□□□□□ -0.13
CPSF1-206ENST00000531480 CATSPERZQ9NTU4 200 aa14.26□□□□□ -0.13
CPSF1-206ENST00000531480 MARCH4Q9P2E8 410 aaPredicted RBP14.26□□□□□ -0.13
CPSF1-206ENST00000531480 GULP1Q9UBP9 304 aa14.26□□□□□ -0.13
CPSF1-206ENST00000531480 SLC23A2Q9UGH3 650 aa14.26□□□□□ -0.13
CPSF1-206ENST00000531480 ZNHIT2Q9UHR6 403 aa14.26□□□□□ -0.13
CPSF1-206ENST00000531480 CFAP99D6REC4 459 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 SIGLEC6O43699 453 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 ANXA6P08133 673 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 ALPPL2P10696 532 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 RALBP11234 206 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 ZNF7P17097 686 aaPredicted RBP14.25□□□□□ -0.13
CPSF1-206ENST00000531480 OGNP20774 298 aaKnown RBP14.25□□□□□ -0.13
CPSF1-206ENST00000531480 ELK3P41970 407 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 NSG1P42857 185 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 TTPAP49638 278 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 ADARP55265 1226 aaKnown RBP14.25□□□□□ -0.13
CPSF1-206ENST00000531480 GUCY2DQ02846 1103 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 GTF2H3Q13889 308 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 LONRF1Q17RB8 773 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 DEFB133Q30KQ1 61 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 FASTKD1Q53R41 847 aaKnown RBP14.25□□□□□ -0.13
CPSF1-206ENST00000531480 SPANXN3Q5MJ09 141 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 TAS2R42Q7RTR8 314 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 EID2Q8N6I1 236 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 LRRN4CLQ8ND94 238 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 GPR156Q8NFN8 814 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 TTC25Q96NG3 672 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 TCF12Q99081 682 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 FAM114A2Q9NRY5 505 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 NCKIPSDQ9NZQ3 722 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 TAAR2Q9P1P5 351 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 MOSPD1Q9UJG1 213 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 PLEKHM1Q9Y4G2 1056 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 GPSM3Q9Y4H4 160 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 MAD1L1Q9Y6D9 718 aa14.25□□□□□ -0.13
CPSF1-206ENST00000531480 C17orf113A0A1B0GUU1 675 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 ESYT3A0FGR9 886 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 QSOX1O00391 747 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 TNFSF14O43557 240 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 NOBOXO60393 691 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 ERLIN1O75477 346 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 GSTM1P09488 218 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 CKMT1AP12532 417 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 RPS3P23396 243 aaKnown RBP eCLIP14.24□□□□□ -0.13
CPSF1-206ENST00000531480 AK4P27144 223 aaPredicted RBP14.24□□□□□ -0.13
CPSF1-206ENST00000531480 ECHS1P30084 290 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 AKT1P31749 480 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 PPARGP37231 505 aaPredicted RBP14.24□□□□□ -0.13
CPSF1-206ENST00000531480 PLTPP55058 493 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 GSTM4Q03013 218 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 FASTKD3Q14CZ7 662 aaKnown RBP14.24□□□□□ -0.13
CPSF1-206ENST00000531480 MAP9Q49MG5 647 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 PPM1JQ5JR12 505 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 MRNIPQ6NTE8 343 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 NEPROQ6NW34 567 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 TMEM220Q6QAJ8 160 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 WASH2PQ6VEQ5 465 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 UNC5AQ6ZN44 842 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 CYS1Q717R9 158 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 CENPUQ71F23 418 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 CHST15Q7LFX5 561 aaPredicted RBP14.24□□□□□ -0.13
CPSF1-206ENST00000531480 TAF8Q7Z7C8 310 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 CILP2Q8IUL8 1156 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 TRAPPC5Q8IUR0 188 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 CNTN4Q8IWV2 1026 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.24□□□□□ -0.13
CPSF1-206ENST00000531480 SETD7Q8WTS6 366 aaKnown RBP14.24□□□□□ -0.13
CPSF1-206ENST00000531480 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.24□□□□□ -0.13
CPSF1-206ENST00000531480 SGF29Q96ES7 293 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 DCUN1D1Q96GG9 259 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 APOLD1Q96LR9 279 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 TTC1Q99614 292 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 P2RY12Q9H244 342 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 SLC32A1Q9H598 525 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 WASH6PQ9NQA3 447 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 SPATS2LQ9NUQ6 558 aaKnown RBP14.24□□□□□ -0.13
CPSF1-206ENST00000531480 TOR4AQ9NXH8 423 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 ZC3H7BQ9UGR2 993 aaKnown RBP14.24□□□□□ -0.13
CPSF1-206ENST00000531480 PRKAB1Q9Y478 270 aa14.24□□□□□ -0.13
CPSF1-206ENST00000531480 SPEGQ15772 3267 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 MGAT4DA6NG13 374 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 OR2AG2A6NM03 316 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 DYNC1I1O14576 645 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 FFAR2O15552 330 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 CTIFO43310 598 aaKnown RBP14.23□□□□□ -0.13
CPSF1-206ENST00000531480 KCNK5O95279 499 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms