RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 M0QZ24 198 aa3.78□□□□□ -1.8
PTPRK-220ENST00000531466 BUD23O43709 281 aaKnown RBP3.78□□□□□ -1.8
PTPRK-220ENST00000531466 WDHD1O75717 1129 aaPredicted RBP3.78□□□□□ -1.8
PTPRK-220ENST00000531466 HOXB5P09067 269 aa3.78□□□□□ -1.8
PTPRK-220ENST00000531466 EPHA2P29317 976 aa3.78□□□□□ -1.8
PTPRK-220ENST00000531466 ALG11Q2TAA5 492 aa3.78□□□□□ -1.8
PTPRK-220ENST00000531466 CLEC4GQ6UXB4 293 aa3.78□□□□□ -1.8
PTPRK-220ENST00000531466 TMEM143Q96AN5 459 aa3.78□□□□□ -1.8
PTPRK-220ENST00000531466 LTB4R2Q9NPC1 389 aa3.78□□□□□ -1.8
PTPRK-220ENST00000531466 ECHDC1Q9NTX5 307 aa3.78□□□□□ -1.8
PTPRK-220ENST00000531466 SWAP70Q9UH65 585 aa3.78□□□□□ -1.8
PTPRK-220ENST00000531466 PNMA2Q9UL42 364 aa3.78□□□□□ -1.8
PTPRK-220ENST00000531466 MOB4Q9Y3A3 225 aa3.78□□□□□ -1.8
PTPRK-220ENST00000531466 IGHV4-4A0A075B6R2 117 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 USP17L23D6RBM5 183 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 LDLRAD4O15165 306 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 GUCY1B2O75343 617 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 RAF1P04049 648 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 KRTAP1-4P0C5Y4 121 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 TRIM49P0CI25 452 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 TRIM49CP0CI26 452 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 CEBPBP17676 345 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 CDC25CP30307 473 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 PGM1P36871 562 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 FGFBP1Q14512 234 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 DRAP1Q14919 205 aaPredicted RBP3.77□□□□□ -1.81
PTPRK-220ENST00000531466 C10orf62Q5T681 223 aaPredicted RBP3.77□□□□□ -1.81
PTPRK-220ENST00000531466 MAP3K21Q5TCX8 1036 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 ZNF343Q6P1L6 599 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 IGSF8Q969P0 613 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 GIMAP5Q96F15 307 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 CHMP4BQ9H444 224 aaKnown RBP3.77□□□□□ -1.81
PTPRK-220ENST00000531466 PRAG1Q86YV5 1406 aa3.77□□□□□ -1.81
PTPRK-220ENST00000531466 GAGE10A6NGK3 116 aa3.76□□□□□ -1.81
PTPRK-220ENST00000531466 SEC31AO94979 1220 aaKnown RBP3.76□□□□□ -1.81
PTPRK-220ENST00000531466 COX7A2P14406 83 aa3.76□□□□□ -1.81
PTPRK-220ENST00000531466 CAPN2P17655 700 aa3.76□□□□□ -1.81
PTPRK-220ENST00000531466 PAX3P23760 479 aa3.76□□□□□ -1.81
PTPRK-220ENST00000531466 HOXC9P31274 260 aa3.76□□□□□ -1.81
PTPRK-220ENST00000531466 CDAP32320 146 aa3.76□□□□□ -1.81
PTPRK-220ENST00000531466 DHX8Q14562 1220 aaKnown RBP3.76□□□□□ -1.81
PTPRK-220ENST00000531466 ZRSR2Q15696 482 aaKnown RBP3.76□□□□□ -1.81
PTPRK-220ENST00000531466 GRAMD1BQ3KR37 738 aa3.76□□□□□ -1.81
PTPRK-220ENST00000531466 LCE1CQ5T751 118 aa3.76□□□□□ -1.81
PTPRK-220ENST00000531466 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
PTPRK-220ENST00000531466 ANO1Q5XXA6 986 aa3.76□□□□□ -1.81
PTPRK-220ENST00000531466 LRRTM1Q86UE6 522 aa3.76□□□□□ -1.81
PTPRK-220ENST00000531466 ZNF584Q8IVC4 421 aa3.76□□□□□ -1.81
PTPRK-220ENST00000531466 SNRNP27Q8WVK2 155 aaKnown RBP3.76□□□□□ -1.81
PTPRK-220ENST00000531466 TSPAN18Q96SJ8 248 aa3.76□□□□□ -1.81
PTPRK-220ENST00000531466 ITM2CQ9NQX7 267 aa3.76□□□□□ -1.81
PTPRK-220ENST00000531466 SLC6A13Q9NSD5 602 aa3.76□□□□□ -1.81
PTPRK-220ENST00000531466 hCG_1642624A0A1W2PR95 340 aa3.75□□□□□ -1.81
PTPRK-220ENST00000531466 TCEA3O75764 348 aa3.75□□□□□ -1.81
PTPRK-220ENST00000531466 KCNK5O95279 499 aa3.75□□□□□ -1.81
PTPRK-220ENST00000531466 FRMD6-AS1P0C7T7 363 aa3.75□□□□□ -1.81
PTPRK-220ENST00000531466 UBA1P22314 1058 aaKnown RBP3.75□□□□□ -1.81
PTPRK-220ENST00000531466 CEACAM8P31997 349 aaPredicted RBP3.75□□□□□ -1.81
PTPRK-220ENST00000531466 ANP32AP39687 249 aaKnown RBP3.75□□□□□ -1.81
PTPRK-220ENST00000531466 COX10Q12887 443 aa3.75□□□□□ -1.81
PTPRK-220ENST00000531466 SLC9B1Q4ZJI4 515 aa3.75□□□□□ -1.81
PTPRK-220ENST00000531466 BBS12Q6ZW61 710 aa3.75□□□□□ -1.81
PTPRK-220ENST00000531466 NAP1L4Q99733 375 aaKnown RBP3.75□□□□□ -1.81
PTPRK-220ENST00000531466 PYM1Q9BRP8 204 aaKnown RBP3.75□□□□□ -1.81
PTPRK-220ENST00000531466 GPATCH1Q9BRR8 931 aaKnown RBP3.75□□□□□ -1.81
PTPRK-220ENST00000531466 HERPUD2Q9BSE4 406 aa3.75□□□□□ -1.81
PTPRK-220ENST00000531466 DLGAP2Q9P1A6 1054 aa3.75□□□□□ -1.81
PTPRK-220ENST00000531466 SLC25A10Q9UBX3 287 aaPredicted RBP3.75□□□□□ -1.81
PTPRK-220ENST00000531466 RABGAP1Q9Y3P9 1069 aa3.75□□□□□ -1.81
PTPRK-220ENST00000531466 RPS6KL1Q9Y6S9 549 aa3.75□□□□□ -1.81
PTPRK-220ENST00000531466 IGLV3-10A0A075B6K4 115 aa3.74□□□□□ -1.81
PTPRK-220ENST00000531466 PLK4O00444 970 aa3.74□□□□□ -1.81
PTPRK-220ENST00000531466 ZNF197O14709 1029 aa3.74□□□□□ -1.81
PTPRK-220ENST00000531466 AP2A2O94973 939 aa3.74□□□□□ -1.81
PTPRK-220ENST00000531466 RAPSNQ13702 412 aa3.74□□□□□ -1.81
PTPRK-220ENST00000531466 HNRNPDQ14103 355 aaKnown RBP3.74□□□□□ -1.81
PTPRK-220ENST00000531466 PDCD2Q16342 344 aaPredicted RBP3.74□□□□□ -1.81
PTPRK-220ENST00000531466 CTU2Q2VPK5 515 aaKnown RBP3.74□□□□□ -1.81
PTPRK-220ENST00000531466 FASTKD1Q53R41 847 aaKnown RBP3.74□□□□□ -1.81
PTPRK-220ENST00000531466 FBXO47Q5MNV8 452 aa3.74□□□□□ -1.81
PTPRK-220ENST00000531466 NDUFAF5Q5TEU4 345 aa3.74□□□□□ -1.81
PTPRK-220ENST00000531466 ZDHHC20Q5W0Z9 365 aa3.74□□□□□ -1.81
PTPRK-220ENST00000531466 LRRC8DQ7L1W4 858 aa3.74□□□□□ -1.81
PTPRK-220ENST00000531466 PAF1Q8N7H5 531 aa3.74□□□□□ -1.81
PTPRK-220ENST00000531466 OR2L2Q8NH16 312 aa3.74□□□□□ -1.81
PTPRK-220ENST00000531466 OR14L1PQ8NHC6 308 aa3.74□□□□□ -1.81
PTPRK-220ENST00000531466 EVI5LQ96CN4 794 aa3.74□□□□□ -1.81
PTPRK-220ENST00000531466 RRNAD1Q96FB5 475 aaKnown RBP3.74□□□□□ -1.81
PTPRK-220ENST00000531466 STK39Q9UEW8 545 aa3.74□□□□□ -1.81
PTPRK-220ENST00000531466 LRWD1Q9UFC0 647 aa3.74□□□□□ -1.81
PTPRK-220ENST00000531466 OR14J1Q9UGF5 321 aa3.74□□□□□ -1.81
PTPRK-220ENST00000531466 PRO0461Q9UI25 63 aa3.74□□□□□ -1.81
PTPRK-220ENST00000531466 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.73□□□□□ -1.81
PTPRK-220ENST00000531466 EPB41L2O43491 1005 aaKnown RBP3.73□□□□□ -1.81
PTPRK-220ENST00000531466 CSPG5O95196 566 aa3.73□□□□□ -1.81
PTPRK-220ENST00000531466 IL7RP16871 459 aa3.73□□□□□ -1.81
PTPRK-220ENST00000531466 MAN1A1P33908 653 aa3.73□□□□□ -1.81
PTPRK-220ENST00000531466 NKX2-1P43699 371 aaPredicted RBP3.73□□□□□ -1.81
PTPRK-220ENST00000531466 MS4A2Q01362 244 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms