RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 ZWILCHQ9H900 591 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 NHEJ1Q9H9Q4 299 aaPredicted RBP9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 ATXN10Q9UBB4 475 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 CPNE7Q9UBL6 633 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 CNOT8Q9UFF9 292 aaKnown RBP9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 CHKBQ9Y259 395 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 PCM1Q15154 2024 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 DOCK10Q96BY6 2186 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 KIR2DS5A0A0G2JLQ3 304 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 A0A0G2JNG1 304 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 A0A1B0GTL3 188 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 CDC14CA4D256 554 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 KIR2DS3K7RE56 304 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 PJA2O43164 708 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 NUAK1O60285 661 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 KIAA0754O94854 1291 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 FTLP02792 175 aaPredicted RBP9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 HLA-DQB2P05538 268 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 ZNF8P17098 575 aaPredicted RBP9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 TYRP1P17643 537 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 PPM1FP49593 454 aaPredicted RBP9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 SEPHS1P49903 392 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 ZNF135P52742 658 aaPredicted RBP9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 PMS2P54278 862 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 MC1RQ01726 317 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 FOXM1Q08050 763 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 KIF5AQ12840 1032 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 KIR2DS5Q14953 304 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 SPA17Q15506 151 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 PLA2G4EQ3MJ16 856 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 NADK2Q4G0N4 442 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 KHDC1Q4VXA5 237 aaKnown RBP9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 PRR30Q53SZ7 412 aaPredicted RBP9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 CPZQ66K79 652 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 C6orf15Q6UXA7 325 aaPredicted RBP9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 ZNF572Q7Z3I7 529 aaPredicted RBP9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 SLC9B2Q86UD5 537 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 ZNF547Q8IVP9 402 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 CCDC13Q8IYE1 715 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 FAM71BQ8TC56 605 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 ZNF653Q96CK0 615 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 MOCOSQ96EN8 888 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 BTBD6Q96KE9 485 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 CCDC42Q96M95 316 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 HERPUD2Q9BSE4 406 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 POLR1EQ9GZS1 481 aaKnown RBP9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 ANKZF1Q9H8Y5 726 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 LUC7LQ9NQ29 371 aaKnown RBP9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 RCOR3Q9P2K3 495 aaPredicted RBP9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 GUCA1BQ9UMX6 200 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 PCDHGA6Q9Y5G7 932 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 DIDO1Q9BTC0 2240 aaKnown RBP9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 CSMD2Q7Z408 3487 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 APCP25054 2843 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 ANKRD12Q6UB98 2062 aa9.06□□□□□ -0.96
CHMP4A-205ENST00000531158 CROCCQ5TZA2 2017 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 MKRN2OSH3BPM6 223 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 MAP2K7O14733 419 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 CHUKO15111 745 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 GRID2O43424 1007 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 CREG1O75629 220 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 RFPL1O75677 317 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 SORBS2O94875 1100 aaKnown RBP9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 PYGLP06737 847 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 FGF5P12034 268 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 XRCC1P18887 633 aaPredicted RBP9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 MAN1A1P33908 653 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 ARL4AP40617 200 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 GARSP41250 739 aaKnown RBP9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 SLC19A1P41440 591 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 SPINT3P49223 89 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 ARSEP51690 589 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 RPS18P62269 152 aaKnown RBP9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 GALNT2Q10471 571 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 CHAF1BQ13112 559 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 GPS2Q13227 327 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 SEPT6Q14141 434 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 TERF2Q15554 542 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 QPCTQ16769 361 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 LONRF2Q1L5Z9 754 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 NCBP2-AS2Q69YL0 99 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 CERS6Q6ZMG9 384 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 TMEM26Q6ZUK4 368 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 C11orf96Q7Z7L8 435 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 ADGRG6Q86SQ4 1221 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 PLXDC1Q8IUK5 500 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 APLFQ8IW19 511 aaPredicted RBP9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 TEX19Q8NA77 164 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 GPR26Q8NDV2 337 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 LPCAT1Q8NF37 534 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 CT55Q8WUE5 264 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 SH3KBP1Q96B97 665 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 TGM7Q96PF1 710 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 ALS2CR12Q96Q35 445 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 UCK1Q9HA47 277 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 MLXIPLQ9NP71 852 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 KLC4Q9NSK0 619 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 TMPRSS11EQ9UL52 423 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 POLHQ9Y253 713 aa9.05□□□□□ -0.96
CHMP4A-205ENST00000531158 JRKLQ9Y4A0 524 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms