RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 ZCCHC23Q6ZST2 131 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ASCC1Q8N9N2 400 aaKnown RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 STK35Q8TDR2 534 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 TATDN2Q93075 761 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 COL26A1Q96A83 441 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 CREB3L1Q96BA8 519 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 SLC7A6OSQ96CW6 309 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ZNF668Q96K58 619 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 CLPTM1LQ96KA5 538 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 HIST1H2AAQ96QV6 131 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ZYG11BQ9C0D3 744 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 TMLHEQ9NVH6 421 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 SNCAIPQ9Y6H5 919 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 SCAMP1O15126 338 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 NDUFS2O75306 463 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 LGR5O75473 907 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 PNPP00491 289 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 UGT2B4P06133 528 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 PET100P0DJ07 73 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ITGB6P18564 788 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ADRA1DP25100 572 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 DNAJB2P25686 324 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ALDH3B2P48448 385 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ACOT2P49753 483 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 PDIA5Q14554 519 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 PON3Q15166 354 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 PARP6Q2NL67 630 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ASTE1Q2TB18 679 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 COL28A1Q2UY09 1125 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 IDNKQ5T6J7 187 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 COLGALT1Q8NBJ5 622 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 COQ8AQ8NI60 647 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 HASPINQ8TF76 798 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 DYNLL2Q96FJ2 89 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ARL5BQ96KC2 179 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 TMED9Q9BVK6 235 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 BRD9Q9H8M2 597 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ENY2Q9NPA8 101 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 PRMT8Q9NR22 394 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 KCNN3Q9UGI6 736 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ERVK-19Q9WJR5 959 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 RIIAD1A6NNX1 92 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 H0Y858 1186 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 PRKAB2O43741 272 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 NRP2O60462 931 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 RHOBTB3O94955 611 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 LATS1O95835 1130 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 SLC6A2P23975 617 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 CDH5P33151 784 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 RAB4BP61018 213 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 BOP1Q14137 746 aaKnown RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 CRY1Q16526 586 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 BCL2A1Q16548 175 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 PTPRNQ16849 979 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 LSM12Q3MHD2 195 aaKnown RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 MTX3Q5HYI7 312 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ANXA8L1Q5VT79 327 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 SPOCD1Q6ZMY3 1216 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 SLFN11Q7Z7L1 901 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 GPR180Q86V85 440 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 UFD1Q92890 307 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 TMEM203Q969S6 136 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 MALSU1Q96EH3 234 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 C7orf50Q9BRJ6 194 aaKnown RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 FAM126AQ9BYI3 521 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 THAP2Q9H0W7 228 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ZNF334Q9HCZ1 680 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ZNF226Q9NYT6 803 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 TAS2R1Q9NYW7 299 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 COMMD3Q9UBI1 195 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ALS2Q96Q42 1657 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 DPPA5A6NC42 116 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 NEDD8-MDP1E9PL57 170 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 H3BRB1 525 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 MLYCDO95822 493 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 GYPCP04921 128 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 RENBPP51606 427 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 IFI35P80217 286 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 CSTF1Q05048 431 aaKnown RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ZNF844Q08AG5 666 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 ARFRP1Q13795 201 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 NFE2L1Q14494 772 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 INSCQ1MX18 579 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 CRTC2Q53ET0 693 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 PITRM1Q5JRX3 1037 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 SNAP47Q5SQN1 464 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 USP17L6PQ6QN14 398 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 AHSA2Q719I0 299 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 CEP97Q8IW35 865 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 PHTF2Q8N3S3 785 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 CCDC74AQ96AQ1 378 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 OR14A2Q96R54 314 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 RAD9AQ99638 391 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 SYT15Q9BQS2 421 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 B3GNT4Q9C0J1 378 aa7.18□□□□□ -1.26
CTNND1-229ENST00000531014 JPH1Q9HDC5 661 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 SMPD3Q9NY59 655 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-229ENST00000531014 KCND2Q9NZV8 630 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms