RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 TBC1D20Q96BZ9 403 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 PPP1R10Q96QC0 940 aaKnown RBP7.16□□□□□ -1.26
CSDE1-213ENST00000530784 ZNF577Q9BSK1 485 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 TLE6Q9H808 572 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 RGS18Q9NS28 235 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 TBC1D22BQ9NU19 505 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 TMEM161AQ9NX61 479 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 FZD10Q9ULW2 581 aa7.16□□□□□ -1.26
CSDE1-213ENST00000530784 NAP1L2Q9ULW6 460 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-213ENST00000530784 IGLV3-22A0A075B6J6 115 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 CCDC196A0A1B0GTZ2 297 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 ESYT2A0FGR8 921 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 OR6C68A6NDL8 312 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 LOC730098B7Z3J9 87 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 PER2O15055 1255 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 ACAA1P09110 424 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-213ENST00000530784 DHRS4L1P0CG22 281 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 GJC1P36383 396 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 DPP6P42658 865 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 PTPN9P43378 593 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 METAP2P50579 478 aaKnown RBP eCLIP7.15□□□□□ -1.261e-12■□□□□ 10.3
CSDE1-213ENST00000530784 CRYBB1P53674 252 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-213ENST00000530784 LTBQ06643 244 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 ADCK5Q3MIX3 580 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 BMP2KLQ5H9B9 411 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 FAM228AQ86W67 206 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 SMAP1Q8IYB5 467 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-213ENST00000530784 METTL13Q8N6R0 699 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 COLGALT1Q8NBJ5 622 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 CCDC12Q8WUD4 166 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-213ENST00000530784 NCSTNQ92542 709 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 TRIM63Q969Q1 353 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 MAP7D2Q96T17 732 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 CDCA3Q99618 268 aaPredicted RBP7.15□□□□□ -1.26
CSDE1-213ENST00000530784 CXorf56Q9H5V9 222 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 C6orf50Q9HD87 102 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 GRHL1Q9NZI5 618 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 NLKQ9UBE8 527 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 RAI2Q9Y5P3 530 aa7.15□□□□□ -1.26
CSDE1-213ENST00000530784 ATG2AQ2TAZ0 1938 aa7.15□□□□□ -1.27
CSDE1-213ENST00000530784 TMEM221A6NGB7 291 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 M0R296 226 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 MAGEB2O15479 319 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 LDB2O43679 373 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 CLDN7O95471 211 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 VTNP04004 478 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 ENO3P13929 434 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-213ENST00000530784 TMOD1P28289 359 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 GNA11P29992 359 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 RFC1P35251 1148 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-213ENST00000530784 HALP42357 657 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 PCYT1AP49585 367 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 CDH12P55289 794 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 CRYZQ08257 329 aaKnown RBP7.14□□□□□ -1.27
CSDE1-213ENST00000530784 ZRSR2Q15696 482 aaKnown RBP7.14□□□□□ -1.27
CSDE1-213ENST00000530784 CTXN3Q4LDR2 81 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 PLPP4Q5VZY2 271 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 PDXDC1Q6P996 788 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 TRMT1LQ7Z2T5 733 aaKnown RBP7.14□□□□□ -1.27
CSDE1-213ENST00000530784 LRRC43Q8N309 656 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 SETD9Q8NE22 299 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 VN1R2Q8NFZ6 395 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 CEP70Q8NHQ1 597 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 SLC35F5Q8WV83 523 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 CRYGNQ8WXF5 182 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 MRPS27Q92552 414 aaKnown RBP7.14□□□□□ -1.27
CSDE1-213ENST00000530784 RNFT2Q96EX2 444 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 RPGRIP1Q96KN7 1286 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 PHF7Q9BWX1 381 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-213ENST00000530784 KIAA1671Q9BY89 1806 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 ZMYND12Q9H0C1 365 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 TMEM117Q9H0C3 514 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 ITM2CQ9NQX7 267 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 ENTPD7Q9NQZ7 604 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 DNAJC16Q9Y2G8 782 aa7.14□□□□□ -1.27
CSDE1-213ENST00000530784 BAZ2BQ9UIF8 2168 aaKnown RBP7.13□□□□□ -1.27
CSDE1-213ENST00000530784 CKAP5Q14008 2032 aa7.13□□□□□ -1.27
CSDE1-213ENST00000530784 TNNT1P13805 278 aa7.13□□□□□ -1.27
CSDE1-213ENST00000530784 GNLYP22749 145 aa7.13□□□□□ -1.27
CSDE1-213ENST00000530784 CLCN3P51790 818 aa7.13□□□□□ -1.27
CSDE1-213ENST00000530784 NLRP11P59045 1033 aaKnown RBP7.13□□□□□ -1.27
CSDE1-213ENST00000530784 AKAP17AQ02040 695 aaKnown RBP7.13□□□□□ -1.27
CSDE1-213ENST00000530784 EGR4Q05215 589 aa7.13□□□□□ -1.27
CSDE1-213ENST00000530784 HNF4GQ14541 408 aa7.13□□□□□ -1.27
CSDE1-213ENST00000530784 ZNF284Q2VY69 593 aa7.13□□□□□ -1.27
CSDE1-213ENST00000530784 FSCBQ5H9T9 825 aa7.13□□□□□ -1.27
CSDE1-213ENST00000530784 SPATA2LQ8IUW3 424 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-213ENST00000530784 CCDC148Q8NFR7 591 aa7.13□□□□□ -1.27
CSDE1-213ENST00000530784 ELP5Q8TE02 316 aa7.13□□□□□ -1.27
CSDE1-213ENST00000530784 ADAMTS14Q8WXS8 1223 aa7.13□□□□□ -1.27
CSDE1-213ENST00000530784 SUSD6Q92537 303 aa7.13□□□□□ -1.27
CSDE1-213ENST00000530784 ZNF558Q96NG5 402 aa7.13□□□□□ -1.27
CSDE1-213ENST00000530784 SCLT1Q96NL6 688 aa7.13□□□□□ -1.27
CSDE1-213ENST00000530784 CWH43Q9H720 699 aa7.13□□□□□ -1.27
CSDE1-213ENST00000530784 PPCSQ9HAB8 311 aa7.13□□□□□ -1.27
CSDE1-213ENST00000530784 MORC2Q9Y6X9 1032 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-213ENST00000530784 NCOR1O75376 2440 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 NID2Q14112 1375 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 C4orf47A7E2U8 309 aa7.12□□□□□ -1.27
CSDE1-213ENST00000530784 CHMP2AO43633 222 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms