RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 RDH11Q8TC12 318 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 GRAMD1AQ96CP6 724 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 CCDC97Q96F63 343 aaPredicted RBP14.24□□□□□ -0.13
TTC39A-216ENST00000530004 WRAP53Q9BUR4 548 aaKnown RBP14.24□□□□□ -0.13
TTC39A-216ENST00000530004 BOCQ9BWV1 1114 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 INVSQ9Y283 1065 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 PCDHB1Q9Y5F3 818 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 LRRC72A6NJI9 287 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 AGAP14A8MT82 685 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 VPS26AO75436 327 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 SEMA4FO95754 770 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 SBK3P0C264 359 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 ELFN1P0C7U0 828 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 ZNF37AP17032 561 aaPredicted RBP14.24□□□□□ -0.13
TTC39A-216ENST00000530004 SLC26A3P40879 764 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 ETV3P41162 512 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 LIG3P49916 1009 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 NUBP1P53384 320 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 ANGPT1Q15389 498 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 CES4AQ5XG92 561 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 Q6ZVL8 140 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 SPATA21Q7Z572 469 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 CXorf40AQ8TE69 158 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 NELL1Q92832 810 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 SPACA7Q96KW9 195 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 GPR21Q99679 349 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 MRPL57Q9BQC6 102 aaKnown RBP14.24□□□□□ -0.13
TTC39A-216ENST00000530004 FAM126AQ9BYI3 521 aaPredicted RBP14.24□□□□□ -0.13
TTC39A-216ENST00000530004 CLPBQ9H078 707 aa14.24□□□□□ -0.13
TTC39A-216ENST00000530004 MRPL46Q9H2W6 279 aaKnown RBP14.24□□□□□ -0.13
TTC39A-216ENST00000530004 OAS3Q9Y6K5 1087 aaKnown RBP14.24□□□□□ -0.13
TTC39A-216ENST00000530004 PRR23AA6NEV1 266 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 TARM1B6A8C7 271 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 C10orf142B7Z368 130 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 E5RI56 91 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 PSMD11O00231 422 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 MMP20O60882 483 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 PYGLP06737 847 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 RALBP11234 206 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 C6P13671 934 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 CHRM3P20309 590 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 DCDC1P59894 354 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 STX3Q13277 289 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 ITGA9Q13797 1035 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 ACAP2Q15057 778 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 ZNF528Q3MIS6 628 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 SETMARQ53H47 684 aaPredicted RBP14.23□□□□□ -0.13
TTC39A-216ENST00000530004 TECRLQ5HYJ1 363 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 KIAA1161Q6NSJ0 714 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 PAQR3Q6TCH7 311 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 ZYG11AQ6WRX3 759 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 CCDC197Q8NCU1 140 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 KCNJ9Q92806 393 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 SPATA16Q9BXB7 569 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 GPR174Q9BXC1 333 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 FAM83DQ9H4H8 585 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 SYTL2Q9HCH5 934 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 RAD18Q9NS91 495 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 GALPQ9UBC7 116 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 MBD1Q9UIS9 605 aaPredicted RBP14.23□□□□□ -0.13
TTC39A-216ENST00000530004 TRMT6Q9UJA5 497 aaKnown RBP14.23□□□□□ -0.13
TTC39A-216ENST00000530004 GNPTGQ9UJJ9 305 aa14.23□□□□□ -0.13
TTC39A-216ENST00000530004 ZFR2Q9UPR6 939 aaKnown RBP14.23□□□□□ -0.13
TTC39A-216ENST00000530004 IQCF5A8MTL0 148 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 GALR2O43603 387 aaPredicted RBP14.22□□□□□ -0.13
TTC39A-216ENST00000530004 RNGTTO60942 597 aaKnown RBP14.22□□□□□ -0.13
TTC39A-216ENST00000530004 SERPINE1P05121 402 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 SP9P0CG40 484 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 CD9P21926 228 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 RPS3P23396 243 aaKnown RBP eCLIP14.22□□□□□ -0.13
TTC39A-216ENST00000530004 PPP2CBP62714 309 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 RPS21P63220 83 aaKnown RBP14.22□□□□□ -0.13
TTC39A-216ENST00000530004 PPP2CAP67775 309 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 OVGP1Q12889 678 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 ITIH4Q14624 930 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 ACOX1Q15067 660 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 TMEM259Q4ZIN3 620 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 SEL1L3Q68CR1 1132 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 PTRHD1Q6GMV3 140 aaKnown RBP14.22□□□□□ -0.13
TTC39A-216ENST00000530004 HORMAD1Q86X24 394 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 SIDT2Q8NBJ9 832 aaKnown RBP14.22□□□□□ -0.13
TTC39A-216ENST00000530004 SREK1Q8WXA9 508 aaKnown RBP14.22□□□□□ -0.13
TTC39A-216ENST00000530004 SCAMP4Q969E2 229 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 ULK4Q96C45 1275 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 THOC1Q96FV9 657 aaKnown RBP14.22□□□□□ -0.13
TTC39A-216ENST00000530004 SLC30A3Q99726 388 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 LRFN3Q9BTN0 628 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 ABCG8Q9H221 673 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 C6orf106Q9H6K1 298 aaPredicted RBP14.22□□□□□ -0.13
TTC39A-216ENST00000530004 ZNF395Q9H8N7 513 aaPredicted RBP14.22□□□□□ -0.13
TTC39A-216ENST00000530004 OXSMQ9NWU1 459 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 ZDHHC3Q9NYG2 299 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 A0A1W2PQU0 124 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 RGSL1A5PLK6 1076 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 IGLON5A6NGN9 336 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 EBAG9O00559 213 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 NDUFS2O75306 463 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 SNNO75324 88 aaPredicted RBP14.22□□□□□ -0.13
TTC39A-216ENST00000530004 TM7SF2O76062 418 aa14.22□□□□□ -0.13
TTC39A-216ENST00000530004 RBP1P09455 135 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms