RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 TMEM126BQ8IUX1 230 aa18.59■□□□□ 0.57
SSRP1-204ENST00000529002 IQCKQ8N0W5 287 aa18.59■□□□□ 0.57
SSRP1-204ENST00000529002 ZBTB2Q8N680 514 aa18.59■□□□□ 0.57
SSRP1-204ENST00000529002 GPR26Q8NDV2 337 aa18.59■□□□□ 0.57
SSRP1-204ENST00000529002 ARRDC2Q8TBH0 407 aa18.59■□□□□ 0.57
SSRP1-204ENST00000529002 INPP5DQ92835 1189 aa18.59■□□□□ 0.57
SSRP1-204ENST00000529002 CXorf40BQ96DE9 158 aa18.59■□□□□ 0.57
SSRP1-204ENST00000529002 FCRL4Q96PJ5 515 aa18.59■□□□□ 0.57
SSRP1-204ENST00000529002 SMAD5Q99717 465 aaKnown RBP18.59■□□□□ 0.57
SSRP1-204ENST00000529002 POLR1EQ9GZS1 481 aaKnown RBP18.59■□□□□ 0.57
SSRP1-204ENST00000529002 TRIM39Q9HCM9 518 aa18.59■□□□□ 0.57
SSRP1-204ENST00000529002 POT1Q9NUX5 634 aa18.59■□□□□ 0.57
SSRP1-204ENST00000529002 PARVAQ9NVD7 372 aa18.59■□□□□ 0.57
SSRP1-204ENST00000529002 PKD2L2Q9NZM6 624 aa18.59■□□□□ 0.57
SSRP1-204ENST00000529002 SNX7Q9UNH6 387 aa18.59■□□□□ 0.57
SSRP1-204ENST00000529002 DOCK10Q96BY6 2186 aa18.59■□□□□ 0.57
SSRP1-204ENST00000529002 SSU72P8A0A1W2PR75 194 aa18.58■□□□□ 0.56
SSRP1-204ENST00000529002 CPNE3O75131 537 aaKnown RBP18.58■□□□□ 0.56
SSRP1-204ENST00000529002 VARSP26640 1264 aaKnown RBP18.58■□□□□ 0.56
SSRP1-204ENST00000529002 ARL4AP40617 200 aa18.58■□□□□ 0.56
SSRP1-204ENST00000529002 ACY1Q03154 408 aa18.58■□□□□ 0.56
SSRP1-204ENST00000529002 DPYSL2Q16555 572 aa18.58■□□□□ 0.56
SSRP1-204ENST00000529002 KYNUQ16719 465 aa18.58■□□□□ 0.56
SSRP1-204ENST00000529002 UBXN4Q92575 508 aa18.58■□□□□ 0.56
SSRP1-204ENST00000529002 PCMTD1Q96MG8 357 aaPredicted RBP18.58■□□□□ 0.56
SSRP1-204ENST00000529002 PPM1MQ96MI6 270 aa18.58■□□□□ 0.56
SSRP1-204ENST00000529002 RAB33BQ9H082 229 aa18.58■□□□□ 0.56
SSRP1-204ENST00000529002 PCDH9Q9HC56 1237 aa18.58■□□□□ 0.56
SSRP1-204ENST00000529002 ANKRD12Q6UB98 2062 aa18.58■□□□□ 0.56
SSRP1-204ENST00000529002 PDZD2O15018 2839 aa18.57■□□□□ 0.56
SSRP1-204ENST00000529002 MASP2O00187 686 aa18.57■□□□□ 0.56
SSRP1-204ENST00000529002 HNRNPRO43390 633 aaKnown RBP18.57■□□□□ 0.56
SSRP1-204ENST00000529002 LCA5LO95447 670 aa18.57■□□□□ 0.56
SSRP1-204ENST00000529002 CA5AP35218 305 aa18.57■□□□□ 0.56
SSRP1-204ENST00000529002 ANKRD20A8PQ5CZ79 823 aa18.57■□□□□ 0.56
SSRP1-204ENST00000529002 ZNF569Q5MCW4 686 aa18.57■□□□□ 0.56
SSRP1-204ENST00000529002 PLEKHS1Q5SXH7 462 aa18.57■□□□□ 0.56
SSRP1-204ENST00000529002 IZUMO3Q5VZ72 239 aa18.57■□□□□ 0.56
SSRP1-204ENST00000529002 LRRTM4Q86VH4 590 aa18.57■□□□□ 0.56
SSRP1-204ENST00000529002 PSTKQ8IV42 348 aaKnown RBP18.57■□□□□ 0.56
SSRP1-204ENST00000529002 GLIS1Q8NBF1 620 aa18.57■□□□□ 0.56
SSRP1-204ENST00000529002 LYSMD1Q96S90 227 aa18.57■□□□□ 0.56
SSRP1-204ENST00000529002 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.57■□□□□ 0.56
SSRP1-204ENST00000529002 RBM22Q9NW64 420 aaKnown RBP eCLIP18.57■□□□□ 0.56
SSRP1-204ENST00000529002 TCFL5Q9UL49 500 aa18.57■□□□□ 0.56
SSRP1-204ENST00000529002 PKDREJQ9NTG1 2253 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 KMOO15229 486 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 JCHAINP01591 159 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 SLC4A1P02730 911 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 HLA-DQB2P05538 268 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 CAPN1P07384 714 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 PIRTP0C851 137 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 RARAP10276 462 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 ARL4DP49703 201 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 VAV2P52735 878 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 ZNF135P52742 658 aaPredicted RBP18.56■□□□□ 0.56
SSRP1-204ENST00000529002 MMRN1Q13201 1228 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 ELOAQ14241 798 aaKnown RBP18.56■□□□□ 0.56
SSRP1-204ENST00000529002 ALG1LQ6GMV1 187 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 CYB5D1Q6P9G0 228 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 SLC34A3Q8N130 599 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 NEK11Q8NG66 645 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 ZNF501Q96CX3 271 aaPredicted RBP18.56■□□□□ 0.56
SSRP1-204ENST00000529002 MOCOSQ96EN8 888 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 SYT11Q9BT88 431 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 TMPRSS11EQ9UL52 423 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 DNPEPQ9ULA0 475 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 G3BP2Q9UN86 482 aaKnown RBP18.56■□□□□ 0.56
SSRP1-204ENST00000529002 SHOC2Q9UQ13 582 aa18.56■□□□□ 0.56
SSRP1-204ENST00000529002 SETD2Q9BYW2 2564 aaPredicted RBP18.56■□□□□ 0.56
SSRP1-204ENST00000529002 ITPR3Q14573 2671 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 MFSD11O43934 449 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 IDSP22304 550 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 ARCN1P48444 511 aaKnown RBP18.55■□□□□ 0.56
SSRP1-204ENST00000529002 GALNT3Q14435 633 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 CRB2Q5IJ48 1285 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 DNTTIP2Q5QJE6 756 aaKnown RBP18.55■□□□□ 0.56
SSRP1-204ENST00000529002 FKBP15Q5T1M5 1219 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 HGSNATQ68CP4 663 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 SP5Q6BEB4 398 aaPredicted RBP18.55■□□□□ 0.56
SSRP1-204ENST00000529002 FAM198BQ6UWH4 519 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 C11orf96Q7Z7L8 435 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 HPS6Q86YV9 775 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 MCEMP1Q8IX19 187 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 RAVER1Q8IY67 606 aaKnown RBP18.55■□□□□ 0.56
SSRP1-204ENST00000529002 DSELQ8IZU8 1212 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 D2HGDHQ8N465 521 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 CCHCR1Q8TD31 782 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 GLYATL1Q969I3 302 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 TIMM29Q9BSF4 260 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 PCDH18Q9HCL0 1135 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 KCND1Q9NSA2 647 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 PSMD13Q9UNM6 376 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 B3GNT3Q9Y2A9 372 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 COPG1Q9Y678 874 aaKnown RBP18.55■□□□□ 0.56
SSRP1-204ENST00000529002 CSMD2Q7Z408 3487 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 ADGRG4Q8IZF6 3080 aa18.55■□□□□ 0.56
SSRP1-204ENST00000529002 UBA6A0AVT1 1052 aaPredicted RBP18.54■□□□□ 0.56
SSRP1-204ENST00000529002 MEN1O00255 615 aa18.54■□□□□ 0.56
SSRP1-204ENST00000529002 LRRTM2O43300 516 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms