RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	GRPEL1	Q9HAV7	217 aa		11.57	□□□□□ -0.56
PSMC3-205	ENST00000528362	ZNF624	Q9P2J8	865 aa	Predicted RBP	11.57	□□□□□ -0.56
PSMC3-205	ENST00000528362	PISD	Q9UG56	409 aa		11.57	□□□□□ -0.56
PSMC3-205	ENST00000528362	PCDHGA7	Q9Y5G6	932 aa		11.57	□□□□□ -0.56
PSMC3-205	ENST00000528362	LILRA5	A6NI73	299 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	OR2AG2	A6NM03	316 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	OR52A4P	A6NMU1	304 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	AGAP14	A8MT82	685 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	HGS	O14964	777 aa	Predicted RBP	11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	DUX1	O43812	170 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	IFNB1	P01574	187 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	JMJD7	P0C870	316 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	THRA	P10827	490 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	CCL4	P13236	92 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	MPST	P25325	297 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	RPL10	P27635	214 aa	Known RBP	11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	SLC5A2	P31639	672 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	AKT1	P31749	480 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	SLC19A1	P41440	591 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	LIMK2	P53671	638 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	EPHA4	P54764	986 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	DRG2	P55039	364 aa	Known RBP	11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	TMPRSS15	P98073	1019 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	PDE1B	Q01064	536 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	DMPK	Q09013	629 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	SNX1	Q13596	522 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	COL9A2	Q14055	689 aa	Predicted RBP	11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	AGAP9	Q5VTM2	703 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	TMEM220	Q6QAJ8	160 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	ABRAXAS1	Q6UWZ7	409 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	WASH2P	Q6VEQ5	465 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	DET1	Q7L5Y6	550 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	PRUNE1	Q86TP1	453 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	GLIS1	Q8NBF1	620 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	AVL9	Q8NBF6	648 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	TRIM58	Q8NG06	486 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	KCNE4	Q8WWG9	221 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	SH3KBP1	Q96B97	665 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	CMKLR1	Q99788	373 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	TBC1D10A	Q9BXI6	508 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	STN1	Q9H668	368 aa	Known RBP	11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	ASB8	Q9H765	288 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	ETNK1	Q9HBU6	452 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	WASH6P	Q9NQA3	447 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	ZNF148	Q9UQR1	794 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	WDR37	Q9Y2I8	494 aa		11.56	□□□□□ -0.56
PSMC3-205	ENST00000528362	PRAMEF33	A0A0G2JMD5	474 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	PSMD3	O43242	534 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	SGTA	O43765	313 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	NRDC	O43847	1150 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	POP7	O75817	140 aa	Known RBP	11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	ETS1	P14921	441 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	VCL	P18206	1134 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	XRCC1	P18887	633 aa	Predicted RBP	11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	MSH3	P20585	1137 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	ITGAL	P20701	1170 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	IDS	P22304	550 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	FDFT1	P37268	417 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	HADHA	P40939	763 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	SEPT6	Q14141	434 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	POU6F1	Q14863	301 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	CLCA4	Q14CN2	919 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	LONRF2	Q1L5Z9	754 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	FNBP1L	Q5T0N5	605 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	TMEM71	Q6P5X7	295 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	DRICH1	Q6PGQ1	229 aa	Predicted RBP	11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	XKR5	Q6UX68	686 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	TMEM26	Q6ZUK4	368 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	AMZ2	Q86W34	360 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	JAML	Q86YT9	394 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	BEND7	Q8N7W2	519 aa	Predicted RBP	11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	OR52K1	Q8NGK4	314 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	SGF29	Q96ES7	293 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	AHCYL2	Q96HN2	611 aa	Known RBP	11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	DPYSL5	Q9BPU6	564 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	ZMYND15	Q9H091	742 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	PRORY	Q9H606	182 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	UCK1	Q9HA47	277 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	POT1	Q9NUX5	634 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	FOXJ2	Q9P0K8	574 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	PDP2	Q9P2J9	529 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	ACSL6	Q9UKU0	697 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	SLC30A1	Q9Y6M5	507 aa		11.55	□□□□□ -0.56
PSMC3-205	ENST00000528362	MYLK	Q15746	1914 aa		11.54	□□□□□ -0.56
PSMC3-205	ENST00000528362	TRBV5-4	A0A0C4DH59	114 aa		11.54	□□□□□ -0.56
PSMC3-205	ENST00000528362	MROH6	A6NGR9	719 aa		11.54	□□□□□ -0.56
PSMC3-205	ENST00000528362	ERI2	A8K979	691 aa	Known RBP	11.54	□□□□□ -0.56
PSMC3-205	ENST00000528362	C9orf172	C9J069	976 aa		11.54	□□□□□ -0.56
PSMC3-205	ENST00000528362		H7C0S8	307 aa		11.54	□□□□□ -0.56
PSMC3-205	ENST00000528362	NVL	O15381	856 aa	Known RBP	11.54	□□□□□ -0.56
PSMC3-205	ENST00000528362	KLK10	O43240	276 aa		11.54	□□□□□ -0.56
PSMC3-205	ENST00000528362	PRAMEF10	O60809	474 aa		11.54	□□□□□ -0.56
PSMC3-205	ENST00000528362	KCNJ13	O60928	360 aa		11.54	□□□□□ -0.56
PSMC3-205	ENST00000528362	SUN1	O94901	812 aa		11.54	□□□□□ -0.56
PSMC3-205	ENST00000528362	VIP	P01282	170 aa		11.54	□□□□□ -0.56
PSMC3-205	ENST00000528362	FGG	P02679	453 aa		11.54	□□□□□ -0.56
PSMC3-205	ENST00000528362	ZSCAN5DP	P0CG00	497 aa		11.54	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms