RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 GLT6D1Q7Z4J2 308 aa13.97□□□□□ -0.17
CAPN1-212ENST00000527887 ZNF547Q8IVP9 402 aa13.97□□□□□ -0.17
CAPN1-212ENST00000527887 TXLNBQ8N3L3 684 aa13.97□□□□□ -0.17
CAPN1-212ENST00000527887 IL22RA1Q8N6P7 574 aa13.97□□□□□ -0.17
CAPN1-212ENST00000527887 GDAP1Q8TB36 358 aa13.97□□□□□ -0.17
CAPN1-212ENST00000527887 HAUS1Q96CS2 278 aa13.97□□□□□ -0.17
CAPN1-212ENST00000527887 ZNF514Q96K75 400 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-212ENST00000527887 C19orf43Q9BQ61 176 aa13.97□□□□□ -0.17
CAPN1-212ENST00000527887 ARHGAP9Q9BRR9 750 aa13.97□□□□□ -0.17
CAPN1-212ENST00000527887 FSD1LQ9BXM9 530 aa13.97□□□□□ -0.17
CAPN1-212ENST00000527887 BPIFA1Q9NP55 256 aa13.97□□□□□ -0.17
CAPN1-212ENST00000527887 ARFGAP3Q9NP61 516 aa13.97□□□□□ -0.17
CAPN1-212ENST00000527887 OCIAD1Q9NX40 245 aa13.97□□□□□ -0.17
CAPN1-212ENST00000527887 RSPH14Q9UHP6 348 aa13.97□□□□□ -0.17
CAPN1-212ENST00000527887 AAR2Q9Y312 384 aaKnown RBP13.97□□□□□ -0.17
CAPN1-212ENST00000527887 GLYATL1P3A0A0U1RQE8 302 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 CCDC66A2RUB6 948 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 PDZK1P1A8MUH7 402 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 H7C0C1 242 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 UBXN7O94888 489 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 NDUFA10O95299 355 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 C9P02748 559 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 CCDC175P0C221 793 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 PLA2G2AP14555 144 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 AMD1P17707 334 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 HALP42357 657 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 ATP5OP48047 213 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 PDE1BQ01064 536 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 DMPKQ09013 629 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 NOMO1Q15155 1222 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 LLGL1Q15334 1064 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 SNAP47Q5SQN1 464 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 CYB5D1Q6P9G0 228 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 C11orf96Q7Z7L8 435 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 VASH2Q86V25 355 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 AMZ2Q86W34 360 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 TRAPPC5Q8IUR0 188 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 CACNA2D3Q8IZS8 1091 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 DDHD1Q8NEL9 900 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 IPMKQ8NFU5 416 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 BLOC1S5Q8TDH9 187 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 LRRC45Q96CN5 670 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 RTP4Q96DX8 246 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 OXNAD1Q96HP4 312 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-212ENST00000527887 C9orf72Q96LT7 481 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 CATSPER2Q96P56 530 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 TBC1D10AQ9BXI6 508 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 SPRY4Q9C004 299 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 SEMA4CQ9C0C4 833 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 RAB33BQ9H082 229 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 GOLPH3Q9H4A6 298 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 SLC40A1Q9NP59 571 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 SMOXQ9NWM0 555 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 ZNF624Q9P2J8 865 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-212ENST00000527887 EPHA6Q9UF33 1036 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 PILRAQ9UKJ1 303 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 TMPRSS11EQ9UL52 423 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 DNAJC16Q9Y2G8 782 aa13.96□□□□□ -0.17
CAPN1-212ENST00000527887 C5orf60A6NFR6 353 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 C2orf81A6NN90 581 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 A8MU76 341 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 POLR1CO15160 346 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-212ENST00000527887 STX7O15400 261 aaKnown RBP13.95□□□□□ -0.18
CAPN1-212ENST00000527887 RAD1O60671 282 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 MTX2O75431 263 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 STK10O94804 968 aaKnown RBP13.95□□□□□ -0.18
CAPN1-212ENST00000527887 TJP3O95049 919 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 PYGMP11217 842 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 RBL1P28749 1068 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 MAPK9P45984 424 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 RWDD2BP57060 319 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 SRSF6Q13247 344 aaKnown RBP13.95□□□□□ -0.18
CAPN1-212ENST00000527887 MAP7Q14244 749 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 PRPSAP1Q14558 356 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 LONRF2Q1L5Z9 754 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 LINC00303Q3SY05 128 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 FAM182AQ5T1J6 154 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 ANKS6Q68DC2 871 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 RANBP10Q6VN20 620 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 RAD9BQ6WBX8 426 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 CDKL3Q8IVW4 592 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-212ENST00000527887 NLGN4XQ8N0W4 816 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 SLC25A41Q8N5S1 370 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 BEND7Q8N7W2 519 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-212ENST00000527887 NLGN4YQ8NFZ3 816 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-212ENST00000527887 KRT35Q92764 455 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 KIAA1143Q96AT1 154 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-212ENST00000527887 CXorf40BQ96DE9 158 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 ZDHHC12Q96GR4 267 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 HEMGNQ9BXL5 484 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 OSBPL8Q9BZF1 889 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 GBA3Q9H227 469 aa13.95□□□□□ -0.18
CAPN1-212ENST00000527887 SCHIP1Q9P0W5 487 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-212ENST00000527887 FEZ2Q9UHY8 353 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-212ENST00000527887 TMEM184BQ9Y519 407 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-212ENST00000527887 SCN8AQ9UQD0 1980 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 COL6A6A6NMZ7 2263 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 SOWAHDA6NJG2 315 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 J3QKU1 62 aa13.94□□□□□ -0.18
CAPN1-212ENST00000527887 POP7O75817 140 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms