RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 IQCKQ8N0W5 287 aa12.06□□□□□ -0.48
SRPRA-202ENST00000527817 D2HGDHQ8N465 521 aa12.06□□□□□ -0.48
SRPRA-202ENST00000527817 MR1Q95460 341 aa12.06□□□□□ -0.48
SRPRA-202ENST00000527817 FATE1Q969F0 183 aa12.06□□□□□ -0.48
SRPRA-202ENST00000527817 EID2BQ96D98 161 aa12.06□□□□□ -0.48
SRPRA-202ENST00000527817 CXorf40BQ96DE9 158 aa12.06□□□□□ -0.48
SRPRA-202ENST00000527817 PCMTD1Q96MG8 357 aaPredicted RBP12.06□□□□□ -0.48
SRPRA-202ENST00000527817 LRFN5Q96NI6 719 aa12.06□□□□□ -0.48
SRPRA-202ENST00000527817 ZSCAN5AQ9BUG6 496 aa12.06□□□□□ -0.48
SRPRA-202ENST00000527817 SPATA16Q9BXB7 569 aa12.06□□□□□ -0.48
SRPRA-202ENST00000527817 CHST8Q9H2A9 424 aa12.06□□□□□ -0.48
SRPRA-202ENST00000527817 ARFGAP3Q9NP61 516 aa12.06□□□□□ -0.48
SRPRA-202ENST00000527817 ASF1BQ9NVP2 202 aa12.06□□□□□ -0.48
SRPRA-202ENST00000527817 HAUS2Q9NVX0 235 aa12.06□□□□□ -0.48
SRPRA-202ENST00000527817 RBM22Q9NW64 420 aaKnown RBP eCLIP12.06□□□□□ -0.48
SRPRA-202ENST00000527817 DTLQ9NZJ0 730 aa12.06□□□□□ -0.48
SRPRA-202ENST00000527817 LUZP4Q9P127 313 aa12.06□□□□□ -0.48
SRPRA-202ENST00000527817 LRRC10BA6NIK2 292 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 OR52A4PA6NMU1 304 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 TMCO5BA8MYB1 307 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 ATMINO43313 823 aaPredicted RBP12.05□□□□□ -0.48
SRPRA-202ENST00000527817 KRT86O43790 486 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 VEGFDO43915 354 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 KCNJ13O60928 360 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 KLK3P07288 261 aaPredicted RBP12.05□□□□□ -0.48
SRPRA-202ENST00000527817 EBLN1P0CF75 366 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 RARAP10276 462 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 FECHP22830 423 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 IL4RP24394 825 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 CCNCP24863 283 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 ZNF165P49910 485 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 VAV2P52735 878 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 ITGA1P56199 1179 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 GSDMDP57764 484 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 TUBB4BP68371 445 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 HSD11B2P80365 405 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 NIPAL4Q0D2K0 466 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 TUBB2AQ13885 445 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 SEPT7Q16181 437 aaKnown RBP12.05□□□□□ -0.48
SRPRA-202ENST00000527817 SMTNL2Q2TAL5 461 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 ZNF569Q5MCW4 686 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 CRTC3Q6UUV7 619 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 ZNF547Q8IVP9 402 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 CISD2Q8N5K1 135 aaKnown RBP12.05□□□□□ -0.48
SRPRA-202ENST00000527817 TRAM1L1Q8N609 369 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 SLC38A9Q8NBW4 561 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 GPR26Q8NDV2 337 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 LPCAT1Q8NF37 534 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 TEKT4Q8WW24 435 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 HSPH1Q92598 858 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 GLYATL1Q969I3 302 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 TSGA13Q96PP4 275 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 ERGIC2Q96RQ1 377 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 RANBP9Q96S59 729 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 CD180Q99467 661 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 MAP3K3Q99759 626 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 TUBB2BQ9BVA1 445 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 NLNQ9BYT8 704 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 PCDH18Q9HCL0 1135 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 LATS2Q9NRM7 1088 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 RAD18Q9NS91 495 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 GPR83Q9NYM4 423 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 DNAJC16Q9Y2G8 782 aa12.05□□□□□ -0.48
SRPRA-202ENST00000527817 MDC1Q14676 2089 aaKnown RBP12.05□□□□□ -0.48
SRPRA-202ENST00000527817 PIKFYVEQ9Y2I7 2098 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 ANKUB1A6NFN9 424 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 A6NL46 340 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 HNRNPRO43390 633 aaKnown RBP12.04□□□□□ -0.48
SRPRA-202ENST00000527817 SCRG1O75711 98 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 CDK14O94921 469 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 FTLP02792 175 aaPredicted RBP12.04□□□□□ -0.48
SRPRA-202ENST00000527817 TCF4P15884 667 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 ARL4DP49703 201 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 RRADP55042 308 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 DCDC1P59894 354 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 PPP1CAP62136 330 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 GPS2Q13227 327 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 IFI16Q16666 785 aaKnown RBP12.04□□□□□ -0.48
SRPRA-202ENST00000527817 CRB2Q5IJ48 1285 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 PLEKHS1Q5SXH7 462 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 TIGD7Q6NT04 549 aaPredicted RBP12.04□□□□□ -0.48
SRPRA-202ENST00000527817 CERS6Q6ZMG9 384 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 C11orf96Q7Z7L8 435 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 TMEM126BQ8IUX1 230 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.04□□□□□ -0.48
SRPRA-202ENST00000527817 ZNF501Q96CX3 271 aaPredicted RBP12.04□□□□□ -0.48
SRPRA-202ENST00000527817 BARD1Q99728 777 aaKnown RBP12.04□□□□□ -0.48
SRPRA-202ENST00000527817 NUP85Q9BW27 656 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 ZFYVE1Q9HBF4 777 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 MRPL47Q9HD33 250 aaKnown RBP12.04□□□□□ -0.48
SRPRA-202ENST00000527817 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.04□□□□□ -0.48
SRPRA-202ENST00000527817 NFKBIL1Q9UBC1 381 aaPredicted RBP12.04□□□□□ -0.48
SRPRA-202ENST00000527817 TCFL5Q9UL49 500 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 MYO6Q9UM54 1294 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 SNX7Q9UNH6 387 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 SCINQ9Y6U3 715 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 SETD2Q9BYW2 2564 aaPredicted RBP12.04□□□□□ -0.48
SRPRA-202ENST00000527817 F8P00451 2351 aa12.04□□□□□ -0.48
SRPRA-202ENST00000527817 ZFHX3Q15911 3703 aa12.03□□□□□ -0.48
SRPRA-202ENST00000527817 TLCD2A6NGC4 264 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms