RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 SRSF11Q05519 484 aaKnown RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 MBTD1Q05BQ5 628 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 KLHDC7AQ5VTJ3 777 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ZCCHC23Q6ZST2 131 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ASCC1Q8N9N2 400 aaKnown RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 STK35Q8TDR2 534 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 TATDN2Q93075 761 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 COL26A1Q96A83 441 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 CREB3L1Q96BA8 519 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 SLC7A6OSQ96CW6 309 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF668Q96K58 619 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 CLPTM1LQ96KA5 538 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 HIST1H2AAQ96QV6 131 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ZYG11BQ9C0D3 744 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 TMLHEQ9NVH6 421 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 SNCAIPQ9Y6H5 919 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 SCAMP1O15126 338 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 NDUFS2O75306 463 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 LGR5O75473 907 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 PNPP00491 289 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 UGT2B4P06133 528 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 PET100P0DJ07 73 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ITGB6P18564 788 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ADRA1DP25100 572 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 DNAJB2P25686 324 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ALDH3B2P48448 385 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ACOT2P49753 483 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 PDIA5Q14554 519 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 PON3Q15166 354 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 PARP6Q2NL67 630 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ASTE1Q2TB18 679 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 COL28A1Q2UY09 1125 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 IDNKQ5T6J7 187 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 COLGALT1Q8NBJ5 622 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 COQ8AQ8NI60 647 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 HASPINQ8TF76 798 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 DYNLL2Q96FJ2 89 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ARL5BQ96KC2 179 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 TMED9Q9BVK6 235 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 BRD9Q9H8M2 597 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ENY2Q9NPA8 101 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 PRMT8Q9NR22 394 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 KCNN3Q9UGI6 736 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ERVK-19Q9WJR5 959 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 RIIAD1A6NNX1 92 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 H0Y858 1186 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 PRKAB2O43741 272 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 NRP2O60462 931 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 RHOBTB3O94955 611 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 LATS1O95835 1130 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 SLC6A2P23975 617 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 CDH5P33151 784 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 RAB4BP61018 213 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 BOP1Q14137 746 aaKnown RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 CRY1Q16526 586 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 BCL2A1Q16548 175 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 PTPRNQ16849 979 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 LSM12Q3MHD2 195 aaKnown RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 MTX3Q5HYI7 312 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ANXA8L1Q5VT79 327 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 SPOCD1Q6ZMY3 1216 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 SLFN11Q7Z7L1 901 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 GPR180Q86V85 440 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 UFD1Q92890 307 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 TMEM203Q969S6 136 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 MALSU1Q96EH3 234 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 C7orf50Q9BRJ6 194 aaKnown RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 FAM126AQ9BYI3 521 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 THAP2Q9H0W7 228 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF334Q9HCZ1 680 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF226Q9NYT6 803 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 TAS2R1Q9NYW7 299 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 COMMD3Q9UBI1 195 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ALS2Q96Q42 1657 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 DPPA5A6NC42 116 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 NEDD8-MDP1E9PL57 170 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 H3BRB1 525 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 MLYCDO95822 493 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 GYPCP04921 128 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 RENBPP51606 427 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 IFI35P80217 286 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 CSTF1Q05048 431 aaKnown RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ZNF844Q08AG5 666 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 ARFRP1Q13795 201 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 NFE2L1Q14494 772 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 INSCQ1MX18 579 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 CRTC2Q53ET0 693 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 PITRM1Q5JRX3 1037 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 SNAP47Q5SQN1 464 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 USP17L6PQ6QN14 398 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.18□□□□□ -1.26
CTNND1-216ENST00000527467 AHSA2Q719I0 299 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 CEP97Q8IW35 865 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 PHTF2Q8N3S3 785 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 CCDC74AQ96AQ1 378 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 OR14A2Q96R54 314 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 RAD9AQ99638 391 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 SYT15Q9BQS2 421 aa7.18□□□□□ -1.26
CTNND1-216ENST00000527467 B3GNT4Q9C0J1 378 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms