RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 CDYL2Q8N8U2 506 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 ANKFN1Q8N957 763 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 HJURPQ8NCD3 748 aaPredicted RBP17.37■□□□□ 0.37
USH1C-205ENST00000527020 GRIN3AQ8TCU5 1115 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 MYO19Q96H55 970 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 EFHD1Q9BUP0 239 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 GPR63Q9BZJ6 419 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 TM6SF2Q9BZW4 377 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 NUDT4Q9NZJ9 180 aa17.37■□□□□ 0.37
USH1C-205ENST00000527020 PRMT5O14744 637 aaPredicted RBP17.36■□□□□ 0.37
USH1C-205ENST00000527020 EEDO75530 441 aaKnown RBP17.36■□□□□ 0.37
USH1C-205ENST00000527020 LATS1O95835 1130 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 CHEK2O96017 543 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 BMP2P12643 396 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 CKMT2P17540 419 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 ERVK-8P63133 956 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 TXNL4AP83876 142 aaKnown RBP17.36■□□□□ 0.37
USH1C-205ENST00000527020 ROR2Q01974 943 aaKnown RBP17.36■□□□□ 0.37
USH1C-205ENST00000527020 BNIP2Q12982 314 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 APOFQ13790 326 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 PDCD4Q53EL6 469 aaKnown RBP17.36■□□□□ 0.37
USH1C-205ENST00000527020 C6orf136Q5SQH8 315 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 CWF19L1Q69YN2 538 aaKnown RBP17.36■□□□□ 0.37
USH1C-205ENST00000527020 APCDD1Q8J025 514 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 OR6K2Q8NGY2 324 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 LKAAEAR1Q8TD35 194 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 BHMTQ93088 406 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 BOCQ9BWV1 1114 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 PLK2Q9NYY3 685 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 ACTR3BQ9P1U1 418 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 TSR3Q9UJK0 312 aaKnown RBP17.36■□□□□ 0.37
USH1C-205ENST00000527020 SLC30A1Q9Y6M5 507 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 A0A1B0GTW7 788 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 SMIM31A0A1B0GVY4 71 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 SMAD6O43541 496 aaKnown RBP17.36■□□□□ 0.37
USH1C-205ENST00000527020 SLC22A3O75751 556 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 CLPTM1O96005 669 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 PPP3CCP48454 512 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 KCNK10P57789 538 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 PRKCQQ04759 706 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 VEPH1Q14D04 833 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 RABL3Q5HYI8 236 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 ARMC12Q5T9G4 340 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 FAM151BQ6UXP7 276 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 CARM1Q86X55 608 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 DCAF4L2Q8NA75 395 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 MRPS26Q9BYN8 205 aaKnown RBP17.36■□□□□ 0.37
USH1C-205ENST00000527020 TRIM54Q9BYV2 358 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 HIPK3Q9H422 1215 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 DUS2Q9NX74 493 aaKnown RBP17.36■□□□□ 0.37
USH1C-205ENST00000527020 SLAMF8Q9P0V8 285 aa17.36■□□□□ 0.37
USH1C-205ENST00000527020 DHRS12A0PJE2 317 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 SOCS2O14508 198 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 OR7A17O14581 309 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 ARPC2O15144 300 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 BAIAP3O94812 1187 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 STAMBPO95630 424 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 GNRH1P01148 92 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 PSMC3P17980 439 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 RPL5P46777 297 aaKnown RBP17.35■□□□□ 0.37
USH1C-205ENST00000527020 HTR6P50406 440 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 NFYCQ13952 458 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 PCBP2Q15366 365 aaKnown RBP eCLIP17.35■□□□□ 0.37
USH1C-205ENST00000527020 SERPINA9Q86WD7 417 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 KIAA2013Q8IYS2 634 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 SFRP1Q8N474 314 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 TMEM199Q8N511 208 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 ARL14EPQ8N8R7 260 aaPredicted RBP17.35■□□□□ 0.37
USH1C-205ENST00000527020 DNAJB14Q8TBM8 379 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 PRPF18Q99633 342 aaKnown RBP17.35■□□□□ 0.37
USH1C-205ENST00000527020 OSBPL11Q9BXB4 747 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 IL21Q9HBE4 155 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 PCDHB1Q9Y5F3 818 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 AKAP10O43572 662 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 OLFM2O95897 454 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 ETS2P15036 469 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 UGT1A6P19224 532 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 OXTRP30559 389 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 GSK3BP49841 420 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 POLR2JP52435 117 aaKnown RBP17.35■□□□□ 0.37
USH1C-205ENST00000527020 AP1S1P61966 158 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 CDKN3Q16667 212 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 TXNDC8Q6A555 127 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 PPP4R4Q6NUP7 873 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 GOLGA7Q7Z5G4 137 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 ADGRG5Q8IZF4 528 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 MYO1HQ8N1T3 1032 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 PROKR1Q8TCW9 393 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 PPWD1Q96BP3 646 aaKnown RBP17.35■□□□□ 0.37
USH1C-205ENST00000527020 VWCEQ96DN2 955 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 CIPCQ9C0C6 399 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 ZIM2Q9NZV7 527 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 EVLQ9UI08 416 aaPredicted RBP17.35■□□□□ 0.37
USH1C-205ENST00000527020 PRSS21Q9Y6M0 314 aa17.35■□□□□ 0.37
USH1C-205ENST00000527020 PRRG1O14668 218 aa17.34■□□□□ 0.37
USH1C-205ENST00000527020 GIPC1O14908 333 aa17.34■□□□□ 0.37
USH1C-205ENST00000527020 HTRA2O43464 458 aaPredicted RBP17.34■□□□□ 0.37
USH1C-205ENST00000527020 PRAMEF1O95521 474 aa17.34■□□□□ 0.37
USH1C-205ENST00000527020 RPS3P23396 243 aaKnown RBP eCLIP17.34■□□□□ 0.37
USH1C-205ENST00000527020 GKP32189 559 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms