RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 SBK2P0C263 348 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 LINGO3P0C6S8 592 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 GLI4P10075 376 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 CALCBP10092 127 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 ERVK-10P10266 1014 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 GYPEP15421 78 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 PFKFB1P16118 471 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 ATP5JP18859 108 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 TACR2P21452 398 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 DRD1P21728 446 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 PKLRP30613 574 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 UQCRC1P31930 480 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 CDAP32320 146 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 SLC11A1P49279 550 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 TOB1P50616 345 aaPredicted RBP4.44□□□□□ -1.7
CD44-213ENST00000525209 RPS6KA3P51812 740 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 BLVRAP53004 296 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 SUCLG1P53597 346 aaKnown RBP4.44□□□□□ -1.7
CD44-213ENST00000525209 PRKAG1P54619 331 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 AIF1P55008 147 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 CDH13P55290 713 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 LILRA4P59901 499 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 GPC5P78333 572 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 SARNPP82979 210 aaKnown RBP4.44□□□□□ -1.7
CD44-213ENST00000525209 ECT2LQ008S8 904 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 GALK2Q01415 458 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 MVKQ03426 396 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 TLE3Q04726 772 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 MTAPQ13126 283 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 FGFBP1Q14512 234 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 KRT31Q15323 416 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 DLG2Q15700 870 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 MAPK11Q15759 364 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 AANATQ16613 207 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 UGCGQ16739 394 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 VWC2Q2TAL6 325 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 USH1GQ495M9 461 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 IQCCQ4KMZ1 466 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 SOWAHCQ53LP3 525 aaPredicted RBP4.44□□□□□ -1.7
CD44-213ENST00000525209 CXorf66Q5JRM2 361 aaPredicted RBP4.44□□□□□ -1.7
CD44-213ENST00000525209 PLAC9Q5JTB6 97 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 DCST1Q5T197 706 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 ARMC12Q5T9G4 340 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 TXNDC8Q6A555 127 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 DHRS7BQ6IAN0 325 aaPredicted RBP4.44□□□□□ -1.7
CD44-213ENST00000525209 CAPRIN2Q6IMN6 1127 aaKnown RBP4.44□□□□□ -1.7
CD44-213ENST00000525209 TMEM88Q6PEY1 159 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 GLB1LQ6UWU2 654 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 RANBP10Q6VN20 620 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 TCAIMQ8N3R3 496 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 CPXM2Q8N436 756 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 FADS6Q8N9I5 356 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 SLC17A8Q8NDX2 589 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 SETD9Q8NE22 299 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 NUP43Q8NFH3 380 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 OR56B1Q8NGI3 324 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 OR52B4Q8NGK2 314 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 MAFAQ8NHW3 353 aaPredicted RBP4.44□□□□□ -1.7
CD44-213ENST00000525209 FIG4Q92562 907 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 KCNJ9Q92806 393 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 EDAQ92838 391 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 UTP4Q969X6 686 aaKnown RBP4.44□□□□□ -1.7
CD44-213ENST00000525209 SPSB1Q96BD6 273 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 BSCL2Q96G97 398 aaPredicted RBP4.44□□□□□ -1.7
CD44-213ENST00000525209 ZBED3Q96IU2 234 aaPredicted RBP4.44□□□□□ -1.7
CD44-213ENST00000525209 FCRL4Q96PJ5 515 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 ZNF607Q96SK3 696 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 PCYT2Q99447 389 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 FAM83CQ9BQN1 747 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 LLPHQ9BRT6 129 aaKnown RBP4.44□□□□□ -1.7
CD44-213ENST00000525209 NTMT1Q9BV86 223 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 GON7Q9BXV9 100 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 KRTAP9-2Q9BYQ4 174 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 DDX47Q9H0S4 455 aaKnown RBP4.44□□□□□ -1.7
CD44-213ENST00000525209 UBQLN3Q9H347 655 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 LMAN1LQ9HAT1 526 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 SPACA1Q9HBV2 294 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 GLOD4Q9HC38 313 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 GBA2Q9HCG7 927 aaPredicted RBP4.44□□□□□ -1.7
CD44-213ENST00000525209 PCMTD2Q9NV79 361 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 PAG1Q9NWQ8 432 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 DTLQ9NZJ0 730 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 STOML1Q9UBI4 398 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 MTRF1LQ9UGC7 380 aaKnown RBP4.44□□□□□ -1.7
CD44-213ENST00000525209 VPS4AQ9UN37 437 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 ZNF536O15090 1300 aa4.44□□□□□ -1.7
CD44-213ENST00000525209 PARD3Q8TEW0 1356 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 CFAP43Q8NDM7 1665 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 CYP3A7-CYP3A51PA0A087WV96 503 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 A0A0U1RQJ8 604 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 A0A1W2PPM1 405 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 TTC26A0AVF1 554 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 HMX2A2RU54 273 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.43□□□□□ -1.7
CD44-213ENST00000525209 TARM1B6A8C7 271 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 PPP6CO00743 305 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 SMAD9O15198 467 aaKnown RBP4.43□□□□□ -1.7
CD44-213ENST00000525209 OGTO15294 1046 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 LANCL1O43813 399 aa4.43□□□□□ -1.7
CD44-213ENST00000525209 GAS2O43903 313 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms