RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 ZNF544Q6NX49 715 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 EME1Q96AY2 570 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 MRPS30Q9NP92 439 aaKnown RBP16.89■□□□□ 0.29
BEST1-203ENST00000524877 TAGLN3Q9UI15 199 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 H3BQF6 201 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 HLA-DQB2P05538 268 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 FGFR3P22607 806 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 PROZP22891 400 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 JAK1P23458 1154 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 NTSR1P30989 418 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 BUD31P41223 144 aaPredicted RBP16.89■□□□□ 0.29
BEST1-203ENST00000524877 RASGEF1CQ8N431 466 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 NELL1Q92832 810 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 SPATA5L1Q9BVQ7 753 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 ROGDIQ9GZN7 287 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 SLC32A1Q9H598 525 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 ZDHHC3Q9NYG2 299 aa16.89■□□□□ 0.29
BEST1-203ENST00000524877 TNRC6CQ9HCJ0 1690 aaKnown RBP16.88■□□□□ 0.29
BEST1-203ENST00000524877 H3BNH8 94 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 KIAA0355O15063 1070 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 NFATC2Q13469 925 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 NAE1Q13564 534 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 CDYL2Q8N8U2 506 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 PHF21AQ96BD5 680 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 FAM220BPB1ANY3 271 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 TMEM189-UBE2V1I3L0A0 370 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 FFAR2O15552 330 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 CPSF6Q16630 551 aaKnown RBP eCLIP16.88■□□□□ 0.29
BEST1-203ENST00000524877 ZSCAN1Q8NBB4 408 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 LRIG1Q96JA1 1093 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 GPR174Q9BXC1 333 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 ALOX15BO15296 676 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 UMPSP11172 480 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 ANXA8L1Q5VT79 327 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 SLC36A4Q6YBV0 504 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 DEFB123Q8N688 67 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 SCAIQ8N9R8 606 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 CCM2Q9BSQ5 444 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 LMAN1LQ9HAT1 526 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 INVSQ9Y283 1065 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 ARL5AQ9Y689 179 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 DRG2P55039 364 aaKnown RBP16.88■□□□□ 0.29
BEST1-203ENST00000524877 RUNX1T1Q06455 604 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 CSTF3Q12996 717 aaKnown RBP16.88■□□□□ 0.29
BEST1-203ENST00000524877 TSC22D1Q15714 1073 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 KLHL12Q53G59 568 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 CYP4Z2PQ8N1L4 340 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 SPATA6LQ8N4H0 392 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 ZNF248Q8NDW4 579 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 CYGBQ8WWM9 190 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 KRT84Q9NSB2 600 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 CDC14AQ9UNH5 594 aa16.88■□□□□ 0.29
BEST1-203ENST00000524877 IFNGR2P38484 337 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 CRATP43155 626 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 LMAN2Q12907 356 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 MARCH8Q5T0T0 291 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 NCBP2-AS2Q69YL0 99 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 TXNDC5Q8NBS9 432 aaKnown RBP16.87■□□□□ 0.29
BEST1-203ENST00000524877 SEMA3GQ9NS98 782 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 LRCH1Q9Y2L9 728 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 IDH3BO43837 385 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 HIST1H2ABP04908 130 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 CCT8P50990 548 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 SEMG2Q02383 582 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 GPAT3Q53EU6 434 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 HIST3H2AQ7L7L0 130 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 HIST1H2ACQ93077 130 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 ZNF641Q96N77 438 aaPredicted RBP16.87■□□□□ 0.29
BEST1-203ENST00000524877 ACSS3Q9H6R3 686 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 PRR5-ARHGAP8B1AHC4 643 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 GABRDO14764 452 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 KRT33AO76009 404 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 TNFRSF8P28908 595 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 RPL26P61254 145 aaKnown RBP16.87■□□□□ 0.29
BEST1-203ENST00000524877 RPL38P63173 70 aaKnown RBP16.87■□□□□ 0.29
BEST1-203ENST00000524877 PTCRAQ6ISU1 281 aaPredicted RBP16.87■□□□□ 0.29
BEST1-203ENST00000524877 TRIM40Q6P9F5 258 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 DENND1AQ8TEH3 1009 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 IMPAD1Q9NX62 359 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 RPL26L1Q9UNX3 145 aaKnown RBP16.87■□□□□ 0.29
BEST1-203ENST00000524877 COMMD3-BMI1R4GMX3 469 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 FAM155AB1AL88 458 aaPredicted RBP16.87■□□□□ 0.29
BEST1-203ENST00000524877 KMOO15229 486 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 TAS2R50P59544 299 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 PLEKHG6Q3KR16 790 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 KIAA0408Q6ZU52 694 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 ANKRD33Q7Z3H0 272 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 UNC5BQ8IZJ1 945 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 MAPK15Q8TD08 544 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 BTN2A2Q8WVV5 523 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 FIG4Q92562 907 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 DCLRE1BQ9H816 532 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 XPR1Q9UBH6 696 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 MTF2Q9Y483 593 aaPredicted RBP16.87■□□□□ 0.29
BEST1-203ENST00000524877 TSPAN6O43657 245 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 LILRB3O75022 631 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 CTSOP43234 321 aaPredicted RBP16.87■□□□□ 0.29
BEST1-203ENST00000524877 SEC24CP53992 1094 aa16.87■□□□□ 0.29
BEST1-203ENST00000524877 FRG1Q14331 258 aaKnown RBP16.87■□□□□ 0.29
BEST1-203ENST00000524877 LIPMQ5VYY2 423 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms