RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CDKAL1Q5VV42 579 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 STEAP3Q658P3 488 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 B3GNT9Q6UX72 402 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 CHSY3Q70JA7 882 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 ZNF765Q7L2R6 523 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 SZRD1Q7Z422 152 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 BTLAQ7Z6A9 289 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 LINC00523Q86TU6 105 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 PRPF39Q86UA1 669 aaKnown RBP7.47□□□□□ -1.21
HDAC3-216ENST00000523088 TIGD4Q8IY51 512 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 THNSL1Q8IYQ7 743 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 ZDHHC14Q8IZN3 488 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 ADSSL1Q8N142 457 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 CRIPAKQ8N1N5 446 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 PHTF2Q8N3S3 785 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 RIBC1Q8N443 379 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-216ENST00000523088 LINC01465Q8N7H1 131 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 MRPL43Q8N983 215 aaKnown RBP7.47□□□□□ -1.21
HDAC3-216ENST00000523088 C12orf50Q8NA57 414 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-216ENST00000523088 OR13C2Q8NGS9 318 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 SPATA20Q8TB22 786 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 ACTRT2Q8TDY3 377 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 LINC01599Q8WXQ3 324 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 RFFLQ8WZ73 363 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 OR1E3Q8WZA6 343 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 JADE3Q92613 823 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 TAMM41Q96BW9 452 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 PHF21BQ96EK2 531 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 SERAC1Q96JX3 654 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 OR1F2PQ96R84 312 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 OSMRQ99650 979 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 PRRX2Q99811 253 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 ADAM2Q99965 735 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 DPYSL5Q9BPU6 564 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 ZFYVE21Q9BQ24 234 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 ZYG11BQ9C0D3 744 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 TMEM117Q9H0C3 514 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 THAP2Q9H0W7 228 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 CNOT10Q9H9A5 744 aaKnown RBP7.47□□□□□ -1.21
HDAC3-216ENST00000523088 COPS7BQ9H9Q2 264 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-216ENST00000523088 SIAEQ9HAT2 523 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 CRTAC1Q9NQ79 661 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 VPS45Q9NRW7 570 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 ZDHHC18Q9NUE0 388 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 DNAJC11Q9NVH1 559 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 SEPT9Q9UHD8 586 aaPredicted RBP7.47□□□□□ -1.21
HDAC3-216ENST00000523088 DCDC2Q9UHG0 476 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 GLS2Q9UI32 602 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 GGT7Q9UJ14 662 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 MID2Q9UJV3 735 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 ZFR2Q9UPR6 939 aaKnown RBP7.47□□□□□ -1.21
HDAC3-216ENST00000523088 RAD54BQ9Y620 910 aa7.47□□□□□ -1.21
HDAC3-216ENST00000523088 LRRC53A6NM62 1247 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 LINC00587B1AMM8 73 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 NT5C1B-RDH14C9J2C7 533 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 E9PAM4 449 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 AGPSO00116 658 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 PLK4O00444 970 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 DNALI1O14645 258 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-216ENST00000523088 ITGB1BP1O14713 200 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 DCLK1O15075 740 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 MATN3O15232 486 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 CD3EAPO15446 510 aaKnown RBP7.46□□□□□ -1.22
HDAC3-216ENST00000523088 PROM1O43490 865 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 TRMUO75648 421 aaKnown RBP7.46□□□□□ -1.22
HDAC3-216ENST00000523088 RPP40O75818 363 aaKnown RBP7.46□□□□□ -1.22
HDAC3-216ENST00000523088 TDP2O95551 362 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 APOA1P02647 267 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 VTNP04004 478 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 FUCA1P04066 466 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 LINC00271P0C7V0 271 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 ITIH1P19827 911 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 NFKB1P19838 968 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 PDCP20941 246 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 LPOP22079 712 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-216ENST00000523088 WARSP23381 471 aaKnown RBP7.46□□□□□ -1.22
HDAC3-216ENST00000523088 MSX1P28360 303 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 RBL1P28749 1068 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 RCVRNP35243 200 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 MAGEA4P43358 317 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 SLCO1A2P46721 670 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 RPL5P46777 297 aaKnown RBP7.46□□□□□ -1.22
HDAC3-216ENST00000523088 KCNQ1P51787 676 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 CLCN3P51790 818 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 VAV2P52735 878 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 GDF10P55107 478 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 RPS26P62854 115 aaKnown RBP7.46□□□□□ -1.22
HDAC3-216ENST00000523088 IFI35P80217 286 aaPredicted RBP7.46□□□□□ -1.22
HDAC3-216ENST00000523088 FAM189BP81408 668 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 CYP27A1Q02318 531 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 CREMQ03060 361 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 GAD2Q05329 585 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 STX5Q13190 355 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 EFR3AQ14156 821 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 SELPLGQ14242 412 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 PLCL1Q15111 1095 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 RPS6KA2Q15349 733 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 NAB2Q15742 525 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 SSX2Q16385 188 aa7.46□□□□□ -1.22
HDAC3-216ENST00000523088 FAM83EQ2M2I3 478 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms