RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 IQCF5A8MTL0 148 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 PMM2O15305 246 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 NRP2O60462 931 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 EDF1O60869 148 aaKnown RBP16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 DRD4P21917 467 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 CHN2P52757 468 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 RPS24P62847 133 aaKnown RBP16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 PRR5P85299 388 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 HGSNATQ68CP4 663 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 DLK2Q6UY11 383 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 AMER2Q8N7J2 671 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 UXS1Q8NBZ7 420 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 FAM98AQ8NCA5 519 aaKnown RBP16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 NXNL1Q96CM4 212 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 MFSD3Q96ES6 412 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 KCNS3Q9BQ31 491 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 TXNRD2Q9NNW7 524 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 TDP1Q9NUW8 608 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 INTS10Q9NVR2 710 aaKnown RBP16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 CALML5Q9NZT1 146 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 ZNF624Q9P2J8 865 aaPredicted RBP16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 DHRS12A0PJE2 317 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 NEMP2A6NFY4 417 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 MT-CYBP00156 380 aaPredicted RBP16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 DGCR6Q14129 220 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 CPSF7Q8N684 471 aaKnown RBP16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 AUTS2Q8WXX7 1259 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 EXOSC8Q96B26 276 aaKnown RBP16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 TRIM8Q9BZR9 551 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 NOL11Q9H8H0 719 aaKnown RBP16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 EIF2B3Q9NR50 452 aaKnown RBP16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 CNTN3Q9P232 1028 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 CDC14AQ9UNH5 594 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 PLLPQ9Y342 182 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 COL14A1Q05707 1796 aaKnown RBP16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 A0A0J9YYE9 177 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 ZMPSTE24O75844 475 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 BRAT1Q6PJG6 821 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 GJD3Q8N144 294 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 BPIFB6Q8NFQ5 453 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 IGSF9Q9P2J2 1179 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 CRNNQ9UBG3 495 aaPredicted RBP16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 GRIN2DO15399 1336 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 NID2Q14112 1375 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 DNM1LO00429 736 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 ASNA1O43681 348 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 NOL4O94818 638 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 GIMD1P0DJR0 217 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 ZNF792Q3KQV3 632 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 GDPD4Q6W3E5 623 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 BEND5Q7L4P6 421 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 HEATR4Q86WZ0 1026 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 EEF1AKMT1Q8WVE0 214 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 B3GALT6Q96L58 329 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 MKL2Q9ULH7 1088 aa16.09■□□□□ 0.17
PCDHA3-201ENST00000522353 XKRYO14609 159 aa16.08■□□□□ 0.17
PCDHA3-201ENST00000522353 ARRB1P49407 418 aaPredicted RBP16.08■□□□□ 0.17
PCDHA3-201ENST00000522353 ARMC3Q5W041 872 aa16.08■□□□□ 0.17
PCDHA3-201ENST00000522353 CRELD2Q6UXH1 353 aaPredicted RBP16.08■□□□□ 0.17
PCDHA3-201ENST00000522353 IKBIPQ70UQ0 350 aa16.08■□□□□ 0.17
PCDHA3-201ENST00000522353 SNX20Q7Z614 316 aa16.08■□□□□ 0.17
PCDHA3-201ENST00000522353 CLHC1Q8NHS4 586 aa16.08■□□□□ 0.17
PCDHA3-201ENST00000522353 CDADC1Q9BWV3 514 aa16.08■□□□□ 0.17
PCDHA3-201ENST00000522353 TAPBPLQ9BX59 468 aa16.08■□□□□ 0.17
PCDHA3-201ENST00000522353 OR2AG1Q9H205 316 aa16.08■□□□□ 0.17
PCDHA3-201ENST00000522353 DZANK1Q9NVP4 752 aa16.08■□□□□ 0.17
PCDHA3-201ENST00000522353 MRPL39Q9NYK5 338 aaKnown RBP16.08■□□□□ 0.17
PCDHA3-201ENST00000522353 NR2E1Q9Y466 385 aa16.08■□□□□ 0.17
PCDHA3-201ENST00000522353 NR2F6P10588 404 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 KCNE1P15382 129 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 SLC7A2P52569 658 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 KLHL12Q53G59 568 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 AAGABQ6PD74 315 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 FAM43BQ6ZT52 329 aaPredicted RBP16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 LDB1Q86U70 411 aaPredicted RBP16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 IL36AQ9UHA7 158 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 FFAR2O15552 330 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 KERAO60938 352 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 LYPLA1O75608 230 aaPredicted RBP16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 CLCQ05315 142 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 ATP1A4Q13733 1029 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 UBAP2LQ14157 1087 aaKnown RBP16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 ZNF461Q8TAF7 563 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 BTBD1Q9H0C5 482 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 CARS2Q9HA77 564 aaKnown RBP16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 ZNF180Q9UJW8 692 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 SNX10Q9Y5X0 201 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 TMEM150CB9EJG8 249 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 GABRDO14764 452 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 FGF18O76093 207 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 NRIP1P48552 1158 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 MPP1Q00013 466 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 GPR17Q13304 367 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 KIAA0930Q6ICG6 404 aaPredicted RBP16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 KRT74Q7RTS7 529 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 FAM129CQ86XR2 697 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 C8orf48Q96LL4 319 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 MIPEPQ99797 713 aa16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 NOCTQ9UK39 431 aaKnown RBP16.08■□□□□ 0.16
PCDHA3-201ENST00000522353 EDDM13A0A1B0GTR0 161 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms