RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 SLC9A8Q9Y2E8 581 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 STRCP1A6NGW2 1772 aa13.7□□□□□ -0.22
SYNPO-205ENST00000522122 TNNI3P19429 210 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 POM121L1PQ3SYA9 428 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 CPTPQ5TA50 214 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 SLCO6A1Q86UG4 719 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 ASZ1Q8WWH4 475 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 HMCESQ96FZ2 354 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 FCRL5Q96RD9 977 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 CORO1BQ9BR76 489 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 EURLQ9NYK6 297 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 NUDT4Q9NZJ9 180 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 OGDHLQ9ULD0 1010 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 SESN1Q9Y6P5 492 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 GLYATL1P3A0A0U1RQE8 302 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 TBC1D3BA6NDS4 549 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 ACADMP11310 421 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 ZNF10P21506 573 aaPredicted RBP13.69□□□□□ -0.22
SYNPO-205ENST00000522122 SLC26A3P40879 764 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 SLC1A2P43004 574 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 SYPL2Q5VXT5 272 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 TMEM198Q66K66 360 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 MZT2BQ6NZ67 158 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 SLC24A5Q71RS6 500 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 ARL10Q8N8L6 244 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 BRSK1Q8TDC3 778 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 ADI1Q9BV57 179 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 MAGEH1Q9H213 219 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 KLHL33A6NCF5 533 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 HNF4AP41235 474 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 UGT2B15P54855 530 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 MED22Q15528 200 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 ERICH5Q6P6B1 374 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 RASAL3Q86YV0 1011 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 TCAIMQ8N3R3 496 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 MARVELD2Q8N4S9 558 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 PSMG2Q969U7 264 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 COL26A1Q96A83 441 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 PPCDCQ96CD2 204 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 SLC38A2Q96QD8 506 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 LPIN3Q9BQK8 851 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 CRISPLD1Q9H336 500 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 MOCS1Q9NZB8 636 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 ASB3Q9Y575 518 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 PCDHGC4Q9Y5F7 938 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 BTBD19C9JJ37 291 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 TMCC2O75069 709 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 SERPINB7O75635 380 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 BCAS2O75934 225 aaPredicted RBP13.69□□□□□ -0.22
SYNPO-205ENST00000522122 OR4F21O95013 312 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 IGFBP5P24593 272 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 SLC7A1P30825 629 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 HSPA7P48741 367 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 CSNK2BP67870 215 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 CACNG1Q06432 222 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 NIPAL4Q0D2K0 466 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 DENND5AQ6IQ26 1287 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 C11orf88Q6PI97 169 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 ERI1Q8IV48 349 aaKnown RBP13.69□□□□□ -0.22
SYNPO-205ENST00000522122 CRYBG2Q8N1P7 616 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 OR7D4Q8NG98 312 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 SLC35F5Q8WV83 523 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 DNAJC11Q9NVH1 559 aa13.69□□□□□ -0.22
SYNPO-205ENST00000522122 KIAA1522Q9P206 1035 aaPredicted RBP13.69□□□□□ -0.22
SYNPO-205ENST00000522122 TRBC1P01850 177 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 SMPD1P17405 629 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 CHRNA4P43681 627 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 OLR1P78380 273 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 IL10RBQ08334 325 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 MZT2AQ6P582 158 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 ZNF513Q8N8E2 541 aaPredicted RBP13.68□□□□□ -0.22
SYNPO-205ENST00000522122 CXorf40AQ8TE69 158 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 GATA6Q92908 595 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 HBEGFQ99075 208 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 NEMP2A6NFY4 417 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 TAF4O00268 1085 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 TULP3O75386 442 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 ITPKAP23677 461 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 IL12AP29459 219 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 CORO1AP31146 461 aaKnown RBP13.68□□□□□ -0.22
SYNPO-205ENST00000522122 MAPKAPK2P49137 400 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 TIFAQ96CG3 184 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 VRTNQ9H8Y1 702 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 FANCEQ9HB96 536 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 TOR4AQ9NXH8 423 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 IFT80Q9P2H3 777 aaPredicted RBP13.68□□□□□ -0.22
SYNPO-205ENST00000522122 RAPGEFL1Q9UHV5 662 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 RAB23Q9ULC3 237 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 ACSL4O60488 711 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 OR6B1O95007 311 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 ALDOAP04075 364 aaKnown RBP13.68□□□□□ -0.22
SYNPO-205ENST00000522122 CAPN1P07384 714 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 PABPC4LP0CB38 370 aaKnown RBP13.68□□□□□ -0.22
SYNPO-205ENST00000522122 NR2F6P10588 404 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 PRKAR2AP13861 404 aaKnown RBP13.68□□□□□ -0.22
SYNPO-205ENST00000522122 AQP1P29972 269 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 GUCA1AP43080 201 aaPredicted RBP13.68□□□□□ -0.22
SYNPO-205ENST00000522122 FKBP1BP68106 108 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 OR52E8Q6IFG1 317 aa13.68□□□□□ -0.22
SYNPO-205ENST00000522122 GALNT5Q7Z7M9 940 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms