RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 TRIM61Q5EBN2 209 aa23.82■■□□□ 1.4
PVT1-212ENST00000521951 CTSL3PQ5NE16 218 aa23.82■■□□□ 1.4
PVT1-212ENST00000521951 ZNF549Q6P9A3 640 aa23.82■■□□□ 1.4
PVT1-212ENST00000521951 FBXO38Q6PIJ6 1188 aa23.82■■□□□ 1.4
PVT1-212ENST00000521951 ZC3HC1Q86WB0 502 aaKnown RBP23.82■■□□□ 1.4
PVT1-212ENST00000521951 TRAPPC5Q8IUR0 188 aa23.82■■□□□ 1.4
PVT1-212ENST00000521951 HID1Q8IV36 788 aa23.82■■□□□ 1.4
PVT1-212ENST00000521951 ZNF547Q8IVP9 402 aa23.82■■□□□ 1.4
PVT1-212ENST00000521951 ZNF514Q96K75 400 aaPredicted RBP23.82■■□□□ 1.4
PVT1-212ENST00000521951 PAFAH2Q99487 392 aa23.82■■□□□ 1.4
PVT1-212ENST00000521951 CAAP1Q9H8G2 361 aa23.82■■□□□ 1.4
PVT1-212ENST00000521951 CARS2Q9HA77 564 aaKnown RBP23.82■■□□□ 1.4
PVT1-212ENST00000521951 KLF15Q9UIH9 416 aa23.82■■□□□ 1.4
PVT1-212ENST00000521951 GPR34Q9UPC5 381 aa23.82■■□□□ 1.4
PVT1-212ENST00000521951 PCDHB1Q9Y5F3 818 aa23.82■■□□□ 1.4
PVT1-212ENST00000521951 DGKBQ9Y6T7 804 aa23.82■■□□□ 1.4
PVT1-212ENST00000521951 ADAMTS9Q9P2N4 1935 aa23.81■■□□□ 1.4
PVT1-212ENST00000521951 ESR1P03372 595 aa23.81■■□□□ 1.4
PVT1-212ENST00000521951 NUDT17P0C025 328 aa23.81■■□□□ 1.4
PVT1-212ENST00000521951 OR56A5P0C7T3 313 aa23.81■■□□□ 1.4
PVT1-212ENST00000521951 PKMP14618 531 aaKnown RBP23.81■■□□□ 1.4
PVT1-212ENST00000521951 GNPDA1P46926 289 aa23.81■■□□□ 1.4
PVT1-212ENST00000521951 BCL7AQ4VC05 210 aa23.81■■□□□ 1.4
PVT1-212ENST00000521951 PYCR3Q53H96 274 aa23.81■■□□□ 1.4
PVT1-212ENST00000521951 GRTP1Q5TC63 336 aa23.81■■□□□ 1.4
PVT1-212ENST00000521951 PTRHD1Q6GMV3 140 aaKnown RBP23.81■■□□□ 1.4
PVT1-212ENST00000521951 CRTC3Q6UUV7 619 aa23.81■■□□□ 1.4
PVT1-212ENST00000521951 LRRTM4Q86VH4 590 aa23.81■■□□□ 1.4
PVT1-212ENST00000521951 BEND7Q8N7W2 519 aaPredicted RBP23.81■■□□□ 1.4
PVT1-212ENST00000521951 RBBP8Q99708 897 aa23.81■■□□□ 1.4
PVT1-212ENST00000521951 RHOJQ9H4E5 214 aa23.81■■□□□ 1.4
PVT1-212ENST00000521951 SMOC1Q9H4F8 434 aa23.81■■□□□ 1.4
PVT1-212ENST00000521951 FSCN3Q9NQT6 498 aa23.81■■□□□ 1.4
PVT1-212ENST00000521951 GNPTGQ9UJJ9 305 aa23.81■■□□□ 1.4
PVT1-212ENST00000521951 HCN4Q9Y3Q4 1203 aa23.81■■□□□ 1.4
PVT1-212ENST00000521951 TMEM131Q92545 1883 aa23.81■■□□□ 1.4
PVT1-212ENST00000521951 TNFP01375 233 aa23.8■■□□□ 1.4
PVT1-212ENST00000521951 GCAP28676 217 aa23.8■■□□□ 1.4
PVT1-212ENST00000521951 MSH2P43246 934 aa23.8■■□□□ 1.4
PVT1-212ENST00000521951 PRLHRP49683 370 aa23.8■■□□□ 1.4
PVT1-212ENST00000521951 HK3P52790 923 aa23.8■■□□□ 1.4
PVT1-212ENST00000521951 PLA2G2CQ5R387 149 aa23.8■■□□□ 1.4
PVT1-212ENST00000521951 PRAMEF14Q5SWL7 426 aa23.8■■□□□ 1.4
PVT1-212ENST00000521951 GALNT13Q8IUC8 556 aa23.8■■□□□ 1.4
PVT1-212ENST00000521951 OR2W6PQ8NHA6 318 aa23.8■■□□□ 1.4
PVT1-212ENST00000521951 ATXN7L3BQ96GX2 97 aa23.8■■□□□ 1.4
PVT1-212ENST00000521951 AARSD1Q9BTE6 412 aaKnown RBP23.8■■□□□ 1.4
PVT1-212ENST00000521951 CCDC68Q9H2F9 335 aa23.8■■□□□ 1.4
PVT1-212ENST00000521951 TCEAL2Q9H3H9 227 aaPredicted RBP23.8■■□□□ 1.4
PVT1-212ENST00000521951 ERVMER34-1Q9H9K5 563 aa23.8■■□□□ 1.4
PVT1-212ENST00000521951 DNAJC28Q9NX36 388 aa23.8■■□□□ 1.4
PVT1-212ENST00000521951 GPSM3Q9Y4H4 160 aa23.8■■□□□ 1.4
PVT1-212ENST00000521951 IQCF5A8MTL0 148 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 QSOX1O00391 747 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 SCAMP1O15126 338 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 KMOO15229 486 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 RASGRP1O95267 797 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 CSF2P04141 144 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 INHBAP08476 426 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 SPRP35270 261 aaPredicted RBP23.79■■□□□ 1.4
PVT1-212ENST00000521951 GRIK2Q13002 908 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 RBM20Q5T481 1227 aaKnown RBP23.79■■□□□ 1.4
PVT1-212ENST00000521951 C11orf96Q7Z7L8 435 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 PHACTR4Q8IZ21 702 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 DCAKDQ8WVC6 231 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 VPS39Q96JC1 886 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 DHRS4Q9BTZ2 278 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 TM7SF3Q9NS93 570 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 FETUBQ9UGM5 382 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 GMEB2Q9UKD1 530 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 CORO1CQ9ULV4 474 aaPredicted RBP23.79■■□□□ 1.4
PVT1-212ENST00000521951 PLAAQ9Y263 795 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 COMMD10Q9Y6G5 202 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 IKBKGQ9Y6K9 419 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 LMNAP02545 664 aaKnown RBP23.79■■□□□ 1.4
PVT1-212ENST00000521951 JUNDP17535 347 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 IRX4P78413 519 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 KRT222Q8N1A0 295 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 LKAAEAR1Q8TD35 194 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 OR2M4Q96R27 311 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 NDNQ99608 321 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 SLC24A2Q9UI40 661 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 MTO1Q9Y2Z2 717 aaKnown RBP23.79■■□□□ 1.4
PVT1-212ENST00000521951 PLEKHM1Q9Y4G2 1056 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 DNMT3AQ9Y6K1 912 aaPredicted RBP23.79■■□□□ 1.4
PVT1-212ENST00000521951 DMDP11532 3685 aa23.79■■□□□ 1.4
PVT1-212ENST00000521951 PCDH15Q96QU1 1955 aa23.78■■□□□ 1.4
PVT1-212ENST00000521951 F8W8V4 182 aa23.78■■□□□ 1.4
PVT1-212ENST00000521951 H3BMM5 538 aa23.78■■□□□ 1.4
PVT1-212ENST00000521951 NIPSNAP2O75323 286 aa23.78■■□□□ 1.4
PVT1-212ENST00000521951 POP7O75817 140 aaKnown RBP23.78■■□□□ 1.4
PVT1-212ENST00000521951 NME1P15531 152 aaKnown RBP23.78■■□□□ 1.4
PVT1-212ENST00000521951 ITGB6P18564 788 aa23.78■■□□□ 1.4
PVT1-212ENST00000521951 BLKP51451 505 aa23.78■■□□□ 1.4
PVT1-212ENST00000521951 LIMK2P53671 638 aa23.78■■□□□ 1.4
PVT1-212ENST00000521951 PLA2G4EQ3MJ16 856 aa23.78■■□□□ 1.4
PVT1-212ENST00000521951 ADGRD1Q6QNK2 874 aa23.78■■□□□ 1.4
PVT1-212ENST00000521951 CHST15Q7LFX5 561 aaPredicted RBP23.78■■□□□ 1.4
PVT1-212ENST00000521951 IQCKQ8N0W5 287 aa23.78■■□□□ 1.4
PVT1-212ENST00000521951 GPATCH11Q8N954 259 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms