RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 CIB2O75838 187 aa18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 NFATC1O95644 943 aa18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 LMNAP02545 664 aaKnown RBP18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 CTSLP07711 333 aa18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 ARSAP15289 507 aa18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 CD1EP15812 388 aa18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 FSHRP23945 695 aa18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 CYLC2Q14093 348 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 GPRC6AQ5T6X5 926 aa18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 FRA10AC1Q70Z53 315 aa18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 ETFBKMTQ8IXQ9 262 aa18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 FGF13Q92913 245 aa18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 LRIG1Q96JA1 1093 aa18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 SPATS2LQ9NUQ6 558 aaKnown RBP18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 UTP6Q9NYH9 597 aaKnown RBP18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 SLC7A8Q9UHI5 535 aa18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 TSR3Q9UJK0 312 aaKnown RBP18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 NUP210Q8TEM1 1887 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC9-210ENST00000521667 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 UPK3BL1B0FP48 263 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 UPK3BL2E5RIL1 263 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 UBDO15205 165 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 MLYCDO95822 493 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 NFKBIAP25963 317 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 FOXA1P55317 472 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 ST8SIA6P61647 398 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 ZRSR2Q15696 482 aaKnown RBP18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 PPP1R3AQ16821 1122 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 KHDC1Q4VXA5 237 aaKnown RBP18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 ACSBG2Q5FVE4 666 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 FAM219BQ5XKK7 198 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 SBSNQ6UWP8 590 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 NET1Q7Z628 596 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 TWIST2Q8WVJ9 160 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 ZFYVE19Q96K21 471 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 EBF3Q9H4W6 596 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 SZT2Q5T011 3432 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 GPC4O75487 556 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 TIMP2P16035 220 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 SQLEQ14534 574 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 CRY1Q16526 586 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 ZNF805Q5CZA5 627 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 RARS2Q5T160 578 aaKnown RBP18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 LARP4Q71RC2 724 aaKnown RBP eCLIP18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 ENDOVQ8N8Q3 282 aaKnown RBP18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 PCDH12Q9NPG4 1184 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 LATS2Q9NRM7 1088 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 ELOVL2Q9NXB9 296 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 DKK3Q9UBP4 350 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 NKX1-2Q9UD57 310 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 CD84Q9UIB8 345 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 MSRAQ9UJ68 235 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 C5orf42Q9H799 3197 aa18.23■□□□□ 0.51
TRAPPC9-210ENST00000521667 IGLV3-16A0A075B6K0 115 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 B4GALNT1Q00973 533 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 E2F5Q15329 346 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 TRMT5Q32P41 509 aaKnown RBP18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 TTLL9Q3SXZ7 439 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 C6orf163Q5TEZ5 329 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 DEFB107AQ8IZN7 70 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 HCAR2Q8TDS4 363 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 C3orf30Q96M34 536 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 PANX3Q96QZ0 392 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 KCNA7Q96RP8 456 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 HGH1Q9BTY7 390 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 DCLRE1BQ9H816 532 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 DZANK1Q9NVP4 752 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 EIF2B4Q9UI10 523 aaKnown RBP18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 A0A1B0GTL3 188 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 ATP6AP2A0A1C7CYW4 349 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 HEPACAM2A8MVW5 462 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 E2F3O00716 465 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 AIM2O14862 343 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 PIP5K1BO14986 540 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 RAD51BO15315 384 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 CRCPO75575 148 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 ATP6AP2O75787 350 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 S100BP04271 92 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 XPAP23025 273 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 GET4Q7L5D6 327 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 HSD11B1LQ7Z5J1 315 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 ZNF366Q8N895 744 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 OR56A4Q8NGH8 313 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 ESAMQ96AP7 390 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 SPATA16Q9BXB7 569 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 FAM126AQ9BYI3 521 aaPredicted RBP18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 ABCG8Q9H221 673 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 KCTD5Q9NXV2 234 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 KLHL42Q9P2K6 505 aa18.22■□□□□ 0.51
TRAPPC9-210ENST00000521667 PDE4DIPQ5VU43 2346 aa18.21■□□□□ 0.51
TRAPPC9-210ENST00000521667 FFAR2O15552 330 aa18.21■□□□□ 0.51
TRAPPC9-210ENST00000521667 ESRRBO95718 433 aa18.21■□□□□ 0.51
TRAPPC9-210ENST00000521667 SLC6A11P48066 632 aa18.21■□□□□ 0.51
TRAPPC9-210ENST00000521667 NUDT2P50583 147 aa18.21■□□□□ 0.51
TRAPPC9-210ENST00000521667 DCDC1P59894 354 aa18.21■□□□□ 0.51
TRAPPC9-210ENST00000521667 GAB4Q2WGN9 574 aa18.21■□□□□ 0.51
TRAPPC9-210ENST00000521667 SYVN1Q86TM6 617 aa18.21■□□□□ 0.51
TRAPPC9-210ENST00000521667 PDPRQ8NCN5 879 aa18.21■□□□□ 0.51
TRAPPC9-210ENST00000521667 NXPE3Q969Y0 559 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms