RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ZNF805Q5CZA5 627 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 KCNT1Q5JUK3 1230 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 SPATA1Q5VX52 437 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 C9orf57Q5W0N0 161 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 PMS2CLQ68D20 193 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 BRAT1Q6PJG6 821 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 CHST9Q7L1S5 443 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 BEST3Q8N1M1 668 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 TMTC2Q8N394 836 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 RBMXL3Q8N7X1 1067 aaKnown RBP3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 C1orf131Q8NDD1 294 aaKnown RBP3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 THAP6Q8TBB0 222 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 TRPC4APQ8TEL6 797 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 TMEM19Q96HH6 336 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 GRAMD2BQ96HH9 432 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 IGSF21Q96ID5 467 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 CFAP53Q96M91 514 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 OR2A14Q96R47 310 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 PLEKHF1Q96S99 279 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 SPRY4Q9C004 299 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 TMEM39BQ9GZU3 492 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 RWDD1Q9H446 243 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 UBTD1Q9HAC8 227 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 OGFRQ9NZT2 677 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 COPG2Q9UBF2 871 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 VDAC3Q9Y277 283 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 PCDHGB1Q9Y5G3 927 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 CLIC4Q9Y696 253 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 MYO3AQ8NEV4 1616 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 ANKRD36BQ8N2N9 1353 aa3.25□□□□□ -1.89
HMGB1P41-201ENST00000520234 ABCC3O15438 1527 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 ADGRB3O60242 1522 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 MYOM1P52179 1685 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 PPRC1Q5VV67 1664 aaKnown RBP3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 MED14O60244 1454 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 PLSCR5A0PG75 271 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 A6NCN8 305 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 LILRA5A6NI73 299 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 KRTAP9-6A8MVA2 160 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 ATP2A1O14983 1001 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 GPC4O75487 556 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 TSPAN9O75954 239 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 ALOX12P18054 663 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 S1PR1P21453 382 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 MCM3P25205 808 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 HOXD13P35453 343 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 USP8P40818 1118 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 TMPOP42166 694 aaKnown RBP3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 CAMPP49913 170 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 TAS2R38P59533 333 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 POU3F1Q03052 451 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 IDI1Q13907 227 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 PDE1CQ14123 709 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 SYCP1Q15431 976 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 PLEKHS1Q5SXH7 462 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 LRIF1Q5T3J3 769 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 PAPD4Q6PIY7 484 aaKnown RBP3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 SPSB3Q6PJ21 355 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 PRSS57Q6UWY2 283 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 BRINP3Q76B58 766 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 ARMC9Q7Z3E5 817 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 GPR180Q86V85 440 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 SFR1Q86XK3 245 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 EPHX4Q8IUS5 362 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 RNF113BQ8IZP6 322 aaKnown RBP3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 SRBD1Q8N5C6 995 aaKnown RBP3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 ZBTB8BQ8NAP8 495 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 OR1J2Q8NGS2 313 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 OR8K5Q8NH50 307 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 FIG4Q92562 907 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 ARHGAP45Q92619 1136 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 ZKSCAN4Q969J2 545 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 TRIM44Q96DX7 344 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 QRFPRQ96P65 431 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 NUDCD1Q96RS6 583 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 MTERF1Q99551 399 aaKnown RBP3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 BARD1Q99728 777 aaKnown RBP3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 SDF4Q9BRK5 362 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 C1QTNF4Q9BXJ3 329 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 FTOQ9C0B1 505 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 SLCO5A1Q9H2Y9 848 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 GHITMQ9H3K2 345 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 SEBOXQ9HB31 216 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 EPB41L5Q9HCM4 733 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 TMEM30AQ9NV96 361 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 MTMR10Q9NXD2 777 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 NSMCE4AQ9NXX6 385 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 BCCIPQ9P287 314 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 STK39Q9UEW8 545 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 CTNNA3Q9UI47 895 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 R3HDM2Q9Y2K5 976 aaKnown RBP3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 NPATQ14207 1427 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 CD109Q6YHK3 1445 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 POGZQ7Z3K3 1410 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 SHPRHQ149N8 1683 aa3.24□□□□□ -1.89
HMGB1P41-201ENST00000520234 TUBGCP6Q96RT7 1819 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 USP32Q8NFA0 1604 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 IGHV4OR15-8A0A075B7B6 117 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 SAA2-SAA4A0A096LPE2 208 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms