RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 IDH3AP50213 366 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 OR4D1Q15615 310 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 PIP5KL1Q5T9C9 394 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 FAM91A1Q658Y4 838 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 CERS6Q6ZMG9 384 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 ZNF687Q8N1G0 1237 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 CCNYL1Q8N7R7 359 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 HMGB4Q8WW32 186 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 CCDC97Q96F63 343 aaPredicted RBP14.32□□□□□ -0.12
CLN8-204ENST00000519254 SIPA1Q96FS4 1042 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 STN1Q9H668 368 aaKnown RBP14.32□□□□□ -0.12
CLN8-204ENST00000519254 FBRSQ9HAH7 460 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 SYTL2Q9HCH5 934 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 ARL8BQ9NVJ2 186 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 PKD2L2Q9NZM6 624 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 ESR1P03372 595 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 SPAM1P38567 509 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 ETV3P41162 512 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 NFATC2Q13469 925 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 ACOX1Q15067 660 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 CHRNA6Q15825 494 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 CRY1Q16526 586 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 VWA5B1Q5TIE3 1220 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 AGBL4Q5VU57 503 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 LIPIQ6XZB0 460 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 PIWIL4Q7Z3Z4 852 aaKnown RBP14.32□□□□□ -0.12
CLN8-204ENST00000519254 SNX20Q7Z614 316 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 SERPINA9Q86WD7 417 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 GPR26Q8NDV2 337 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 GIMAP7Q8NHV1 300 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 CCDC126Q96EE4 140 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 TMEM237Q96Q45 408 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 DERL2Q9GZP9 239 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 ASB8Q9H765 288 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 CYP4F12Q9HCS2 524 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 CD248Q9HCU0 757 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 FBXL12Q9NXK8 326 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 ZDHHC2Q9UIJ5 367 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 APPL1Q9UKG1 709 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 IKZF3Q9UKT9 509 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 COQ6Q9Y2Z9 468 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 COMMD10Q9Y6G5 202 aa14.32□□□□□ -0.12
CLN8-204ENST00000519254 GLYATL1P3A0A0U1RQE8 302 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 PRR23AA6NEV1 266 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 AREL1O15033 823 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 MMP20O60882 483 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 VPS26AO75436 327 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 PYGLP06737 847 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 ACADMP11310 421 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 UGT1A6P19224 532 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 NDUFV2P19404 249 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 UGT1A1P22309 533 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 UGT1A4P22310 534 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 UGT1A3P35503 534 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 UGT1A5P35504 534 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 SPINT3P49223 89 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 RPL14P50914 215 aaKnown RBP14.31□□□□□ -0.12
CLN8-204ENST00000519254 PRKAA1Q13131 559 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 TTC31Q49AM3 519 aaPredicted RBP14.31□□□□□ -0.12
CLN8-204ENST00000519254 EPGNQ6UW88 154 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 Q6ZVL8 140 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 FAM124AQ86V42 546 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 SLC22A9Q8IVM8 553 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 PGBD3Q8N328 593 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 SIDT2Q8NBJ9 832 aaKnown RBP14.31□□□□□ -0.12
CLN8-204ENST00000519254 RHEBL1Q8TAI7 183 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 AGR3Q8TD06 166 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 MAPK15Q8TD08 544 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 CD200R1Q8TD46 325 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 KCNJ9Q92806 393 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.31□□□□□ -0.12
CLN8-204ENST00000519254 KLHL29Q96CT2 875 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 SLC7A6OSQ96CW6 309 aaPredicted RBP14.31□□□□□ -0.12
CLN8-204ENST00000519254 PHF21BQ96EK2 531 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 PTCD3Q96EY7 689 aaKnown RBP14.31□□□□□ -0.12
CLN8-204ENST00000519254 CNDP1Q96KN2 507 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 MRGPRX1Q96LB2 322 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 RILPQ96NA2 401 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 ATOH8Q96SQ7 321 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 TFB2MQ9H5Q4 396 aaKnown RBP14.31□□□□□ -0.12
CLN8-204ENST00000519254 COG4Q9H9E3 785 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 C2orf42Q9NWW7 574 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 NCKIPSDQ9NZQ3 722 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 ARMCX1Q9P291 453 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 FADS3Q9Y5Q0 445 aa14.31□□□□□ -0.12
CLN8-204ENST00000519254 CAPN14A8MX76 684 aa14.3□□□□□ -0.12
CLN8-204ENST00000519254 F8W8V4 182 aa14.3□□□□□ -0.12
CLN8-204ENST00000519254 H0YHG0 523 aa14.3□□□□□ -0.12
CLN8-204ENST00000519254 MATN2O00339 956 aa14.3□□□□□ -0.12
CLN8-204ENST00000519254 PRMT5O14744 637 aaPredicted RBP14.3□□□□□ -0.12
CLN8-204ENST00000519254 PCDH8O95206 1070 aa14.3□□□□□ -0.12
CLN8-204ENST00000519254 TSPAN12O95859 305 aa14.3□□□□□ -0.12
CLN8-204ENST00000519254 SERPINA6P08185 405 aa14.3□□□□□ -0.12
CLN8-204ENST00000519254 MTHFD2P13995 350 aa14.3□□□□□ -0.12
CLN8-204ENST00000519254 ITGALP20701 1170 aa14.3□□□□□ -0.12
CLN8-204ENST00000519254 PTPN5P54829 565 aa14.3□□□□□ -0.12
CLN8-204ENST00000519254 KCNJ2P63252 427 aa14.3□□□□□ -0.12
CLN8-204ENST00000519254 GAS6Q14393 721 aa14.3□□□□□ -0.12
CLN8-204ENST00000519254 KRT72Q14CN4 511 aa14.3□□□□□ -0.12
CLN8-204ENST00000519254 SYNPOQ8N3V7 929 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms