RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 TIMM29Q9BSF4 260 aa11.13□□□□□ -0.63
CTNNA1-205ENST00000517904 SPATA16Q9BXB7 569 aa11.13□□□□□ -0.63
CTNNA1-205ENST00000517904 FGF21Q9NSA1 209 aa11.13□□□□□ -0.63
CTNNA1-205ENST00000517904 RBM22Q9NW64 420 aaKnown RBP eCLIP11.13□□□□□ -0.63
CTNNA1-205ENST00000517904 TRIM10Q9UDY6 481 aa11.13□□□□□ -0.63
CTNNA1-205ENST00000517904 RPL26L1Q9UNX3 145 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-205ENST00000517904 SRPK3Q9UPE1 567 aa11.13□□□□□ -0.63
CTNNA1-205ENST00000517904 FARSAQ9Y285 508 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-205ENST00000517904 WDR37Q9Y2I8 494 aa11.13□□□□□ -0.63
CTNNA1-205ENST00000517904 PCDHGB7Q9Y5F8 929 aa11.13□□□□□ -0.63
CTNNA1-205ENST00000517904 SETD2Q9BYW2 2564 aaPredicted RBP11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 ANKRD66B4E2M5 251 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 KMOO15229 486 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 MATN3O15232 486 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 CPNE3O75131 537 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 TMEM63AO94886 807 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 CBX6O95503 412 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 FTLP02792 175 aaPredicted RBP11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 CD48P09326 243 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 CCDC172P0C7W6 258 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 CES1P23141 567 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 ZNF165P49910 485 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 ITGA1P56199 1179 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 SLC25A11Q02978 314 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 GALNT2Q10471 571 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 AGAP9Q5VTM2 703 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 IZUMO3Q5VZ72 239 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 NCBP2-AS2Q69YL0 99 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 LCN10Q6JVE6 187 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 WASH2PQ6VEQ5 465 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 APTXQ7Z2E3 356 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 LRRTM4Q86VH4 590 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 LRRC49Q8IUZ0 686 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 RHOT1Q8IXI2 618 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 RBM12BQ8IXT5 1001 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 GPR150Q8NGU9 434 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 CCHCR1Q8TD31 782 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 UBXN4Q92575 508 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 MR1Q95460 341 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 GLYATL1Q969I3 302 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 ZNF653Q96CK0 615 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 CXorf40BQ96DE9 158 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 ZNF514Q96K75 400 aaPredicted RBP11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 RANBP9Q96S59 729 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 MAP3K3Q99759 626 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 ZSCAN5AQ9BUG6 496 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 MLPHQ9BV36 600 aaPredicted RBP11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 NUP85Q9BW27 656 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 NUP62CLQ9H1M0 184 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 CHST8Q9H2A9 424 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 WASH6PQ9NQA3 447 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 MYO1AQ9UBC5 1043 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 LIMA1Q9UHB6 759 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 SCINQ9Y6U3 715 aa11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 DIDO1Q9BTC0 2240 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-205ENST00000517904 CROCCQ5TZA2 2017 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 SSU72P8A0A1W2PR75 194 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 A6NL46 340 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 ZNF185O15231 689 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 SCRG1O75711 98 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 JCHAINP01591 159 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 PIRTP0C851 137 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 IDSP22304 550 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 CA4P22748 312 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 FECHP22830 423 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 CD86P42081 329 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 DCDC1P59894 354 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 ACY1Q03154 408 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 RAPSNQ13702 412 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 GALNT3Q14435 633 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 GPR19Q15760 415 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 FAM182AQ5T1J6 154 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 PRAMEF17Q5VTA0 474 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 E4F1Q66K89 784 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 ZNF571Q7Z3V5 609 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 BPHLQ86WA6 291 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 D2HGDHQ8N465 521 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 TRAM1L1Q8N609 369 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 ENDOVQ8N8Q3 282 aaKnown RBP11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 TEKT4Q8WW24 435 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 C5orf34Q96MH7 638 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 ZFYVE1Q9HBF4 777 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 ASF1BQ9NVP2 202 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 GPR83Q9NYM4 423 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 AMACRQ9UHK6 382 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 TMPRSS11EQ9UL52 423 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 SHOC2Q9UQ13 582 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 SLC5A6Q9Y289 635 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 F8P00451 2351 aa11.11□□□□□ -0.63
CTNNA1-205ENST00000517904 PIKFYVEQ9Y2I7 2098 aa11.1□□□□□ -0.63
CTNNA1-205ENST00000517904 SEC16AO15027 2179 aa11.1□□□□□ -0.63
CTNNA1-205ENST00000517904 NF1P21359 2839 aa11.1□□□□□ -0.63
CTNNA1-205ENST00000517904 LRRC53A6NM62 1247 aa11.1□□□□□ -0.63
CTNNA1-205ENST00000517904 DDX3XO00571 662 aaKnown RBP eCLIP11.1□□□□□ -0.63
CTNNA1-205ENST00000517904 CDK14O94921 469 aa11.1□□□□□ -0.63
CTNNA1-205ENST00000517904 SLC4A1P02730 911 aa11.1□□□□□ -0.63
CTNNA1-205ENST00000517904 GZMAP12544 262 aa11.1□□□□□ -0.63
CTNNA1-205ENST00000517904 PRF1P14222 555 aa11.1□□□□□ -0.63
CTNNA1-205ENST00000517904 CCNCP24863 283 aa11.1□□□□□ -0.63
CTNNA1-205ENST00000517904 ELAVL4P26378 380 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms