RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 SPPL2AQ8TCT8 520 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 DNAJB3Q8WWF6 145 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 MYLPFQ96A32 169 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 LINGO1Q96FE5 620 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 TPD52L3Q96J77 140 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 HEPHQ9BQS7 1158 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 TSEN34Q9BSV6 310 aaKnown RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 RBM38Q9H0Z9 239 aaKnown RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 SOX17Q9H6I2 414 aaPredicted RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 STMN3Q9NZ72 180 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 PCDHGA4Q9Y5G9 962 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 IGKV6-21A0A0C4DH24 114 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 KRBA1A5PL33 1030 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 CCDC182A6NF36 153 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 C5orf58C9J3I9 102 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 CXCL11O14625 94 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 KERAO60938 352 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 PAPSS2O95340 614 aaPredicted RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 MATN4O95460 622 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 PFKMP08237 780 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 IFNA8P32881 189 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 CA8P35219 290 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 CHRNA4P43681 627 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 GJA9P57773 515 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 C1QTNF8P60827 252 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 BLOC1S3Q6QNY0 202 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 CLEC20AQ6ZU45 233 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 SAPCD2Q86UD0 394 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 ADGRG5Q8IZF4 528 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 SCML4Q8N228 414 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 TMEM199Q8N511 208 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 OR10A6Q8NH74 314 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 PPTC7Q8NI37 304 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 SLC13A3Q8WWT9 602 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 RASSF5Q8WWW0 418 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 STARD8Q92502 1023 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 FEM1AQ9BSK4 669 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 FUNDC2Q9BWH2 189 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 OSBPL10Q9BXB5 764 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 SLC39A8Q9C0K1 460 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 MUC3BQ9H195 1237 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 GPN2Q9H9Y4 310 aaPredicted RBP6.6□□□□□ -1.35
CPNE3-203ENST00000517490 MTMR10Q9NXD2 777 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 NUDT4Q9NZJ9 180 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 HSFX1Q9UBD0 423 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 CDH7Q9ULB5 785 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 PCDHB3Q9Y5E6 796 aa6.6□□□□□ -1.35
CPNE3-203ENST00000517490 LOXHD1Q8IVV2 1947 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 PPEF2O14830 753 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 FAM163BP0C2L3 166 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 CD36P16671 472 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 LEPRP48357 1165 aaKnown RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 KPNA1P52294 538 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 LILRA4P59901 499 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 ACOX1Q15067 660 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 RAB43Q86YS6 212 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 RTL3Q8N8U3 475 aaKnown RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 TTC29Q8NA56 475 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 FAR1Q8WVX9 515 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 TMEM74Q96NL1 305 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 LHPPQ9H008 270 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 NECTIN3Q9NQS3 549 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 OLA1Q9NTK5 396 aaKnown RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 TMEM161AQ9NX61 479 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 MRPL42Q9Y6G3 142 aaKnown RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 SLC12A8A0AV02 714 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 RBM47A0AV96 593 aaKnown RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 CASTOR2A6NHX0 329 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 EEDO75530 441 aaKnown RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 OR4F21O95013 312 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 GOT2P00505 430 aaKnown RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 IL6P05231 212 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 HLA-DQB2P05538 268 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 PKMP14618 531 aaKnown RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 DDX5P17844 614 aaKnown RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 DGKAP23743 735 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 GNPDA1P46926 289 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 IDH2P48735 452 aaKnown RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 SLC11A2P49281 568 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 NUMBP49757 651 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 CDC42P60953 191 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 UFM1P61960 85 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 ZNF177Q13360 481 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 ARHGEF7Q14155 803 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 UNC50Q53HI1 259 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 C6orf183Q5T699 404 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 CES4AQ5XG92 561 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 NANOGP8Q6NSW7 305 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 TUBA3EQ6PEY2 450 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 PLEKHG7Q6ZR37 379 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 PRR23CQ6ZRP0 262 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 AHSA2Q719I0 299 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 LYSMD3Q7Z3D4 306 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 GRPEL2Q8TAA5 225 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 FBXO32Q969P5 355 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 L3HYPDHQ96EM0 354 aa6.59□□□□□ -1.35
CPNE3-203ENST00000517490 DUS3LQ96G46 650 aaKnown RBP6.59□□□□□ -1.35
CPNE3-203ENST00000517490 KLHL5Q96PQ7 755 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms