RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 TGIF1Q15583 401 aa12.85□□□□□ -0.35
CDK7-212ENST00000515180 KCTD19Q17RG1 926 aaPredicted RBP12.85□□□□□ -0.35
CDK7-212ENST00000515180 LDLRAP1Q5SW96 308 aa12.85□□□□□ -0.35
CDK7-212ENST00000515180 TMEM71Q6P5X7 295 aa12.85□□□□□ -0.35
CDK7-212ENST00000515180 FAM83HQ6ZRV2 1179 aaPredicted RBP12.85□□□□□ -0.35
CDK7-212ENST00000515180 DDHD1Q8NEL9 900 aa12.85□□□□□ -0.35
CDK7-212ENST00000515180 OR10G6Q8NH81 332 aa12.85□□□□□ -0.35
CDK7-212ENST00000515180 DTX3LQ8TDB6 740 aa12.85□□□□□ -0.35
CDK7-212ENST00000515180 NCSTNQ92542 709 aa12.85□□□□□ -0.35
CDK7-212ENST00000515180 PMEPA1Q969W9 287 aa12.85□□□□□ -0.35
CDK7-212ENST00000515180 SGF29Q96ES7 293 aa12.85□□□□□ -0.35
CDK7-212ENST00000515180 FCRL3Q96P31 734 aaPredicted RBP12.85□□□□□ -0.35
CDK7-212ENST00000515180 CMKLR1Q99788 373 aa12.85□□□□□ -0.35
CDK7-212ENST00000515180 STN1Q9H668 368 aaKnown RBP12.85□□□□□ -0.35
CDK7-212ENST00000515180 ARNT2Q9HBZ2 717 aa12.85□□□□□ -0.35
CDK7-212ENST00000515180 FOXJ2Q9P0K8 574 aa12.85□□□□□ -0.35
CDK7-212ENST00000515180 FAM8A1Q9UBU6 413 aa12.85□□□□□ -0.35
CDK7-212ENST00000515180 PSMD13Q9UNM6 376 aa12.85□□□□□ -0.35
CDK7-212ENST00000515180 WDFY3Q8IZQ1 3526 aa12.85□□□□□ -0.35
CDK7-212ENST00000515180 ZNF106Q9H2Y7 1883 aaKnown RBP12.85□□□□□ -0.35
CDK7-212ENST00000515180 OR5K4A6NMS3 321 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 OR52A4PA6NMU1 304 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 LDB2O43679 373 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 DUX1O43812 170 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 CRTAMO95727 393 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 VIPP01282 170 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 IFNB1P01574 187 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 PRSS56P0CW18 603 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 THRAP10827 490 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 FGF3P11487 239 aaPredicted RBP12.84□□□□□ -0.35
CDK7-212ENST00000515180 SLC2A4P14672 509 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 XRCC1P18887 633 aaPredicted RBP12.84□□□□□ -0.35
CDK7-212ENST00000515180 MSH3P20585 1137 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 IDSP22304 550 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 ZNF140P52738 457 aaPredicted RBP12.84□□□□□ -0.35
CDK7-212ENST00000515180 GPLD1P80108 840 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 SRSF6Q13247 344 aaKnown RBP12.84□□□□□ -0.35
CDK7-212ENST00000515180 CLN3Q13286 438 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 SQSTM1Q13501 440 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 SEPT6Q14141 434 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 NFE2L1Q14494 772 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 CLCA4Q14CN2 919 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 SIX1Q15475 284 aaPredicted RBP12.84□□□□□ -0.35
CDK7-212ENST00000515180 OASLQ15646 514 aaKnown RBP12.84□□□□□ -0.35
CDK7-212ENST00000515180 FNBP1LQ5T0N5 605 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 ABRAXAS1Q6UWZ7 409 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 ZFAND4Q86XD8 727 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 TRIM48Q8IWZ4 208 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 GLIS1Q8NBF1 620 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 OR4D9Q8NGE8 314 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 JPH3Q8WXH2 748 aaPredicted RBP12.84□□□□□ -0.35
CDK7-212ENST00000515180 SH3KBP1Q96B97 665 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 DNAJC1Q96KC8 554 aaKnown RBP12.84□□□□□ -0.35
CDK7-212ENST00000515180 BBC3Q96PG8 261 aaPredicted RBP12.84□□□□□ -0.35
CDK7-212ENST00000515180 LRRC40Q9H9A6 602 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 ETNK1Q9HBU6 452 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 SMOXQ9NWM0 555 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 OCIAD1Q9NX40 245 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 KLHL3Q9UH77 587 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 ZNF148Q9UQR1 794 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 SLC30A1Q9Y6M5 507 aa12.84□□□□□ -0.35
CDK7-212ENST00000515180 C9orf172C9J069 976 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 AP2A1O95782 977 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 TYRP1P17643 537 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 MC4RP32245 332 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 GRIA1P42261 906 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 MLLT3P42568 568 aaPredicted RBP12.83□□□□□ -0.36
CDK7-212ENST00000515180 POU6F1Q14863 301 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 CLPPQ16740 277 aaPredicted RBP12.83□□□□□ -0.36
CDK7-212ENST00000515180 P3H1Q32P28 736 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 SOWAHCQ53LP3 525 aaPredicted RBP12.83□□□□□ -0.36
CDK7-212ENST00000515180 ARHGAP40Q5TG30 622 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 TMEM26Q6ZUK4 368 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 AMZ2Q86W34 360 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 OR52K1Q8NGK4 314 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 RTP4Q96DX8 246 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 PPP1R2P1Q96PQ5 205 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 TLR10Q9BXR5 811 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.83□□□□□ -0.36
CDK7-212ENST00000515180 ZCCHC2Q9C0B9 1178 aaKnown RBP12.83□□□□□ -0.36
CDK7-212ENST00000515180 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.83□□□□□ -0.36
CDK7-212ENST00000515180 OGFRQ9NZT2 677 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 CRLS1Q9UJA2 301 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 PPP2R2CQ9Y2T4 447 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 PCDHGA7Q9Y5G6 932 aa12.83□□□□□ -0.36
CDK7-212ENST00000515180 CHD6Q8TD26 2715 aa12.82□□□□□ -0.36
CDK7-212ENST00000515180 EFCAB7A8K855 629 aa12.82□□□□□ -0.36
CDK7-212ENST00000515180 NVLO15381 856 aaKnown RBP12.82□□□□□ -0.36
CDK7-212ENST00000515180 PSMD3O43242 534 aa12.82□□□□□ -0.36
CDK7-212ENST00000515180 SGTAO43765 313 aa12.82□□□□□ -0.36
CDK7-212ENST00000515180 ZNF189O75820 626 aaPredicted RBP12.82□□□□□ -0.36
CDK7-212ENST00000515180 ZSCAN5DPP0CG00 497 aa12.82□□□□□ -0.36
CDK7-212ENST00000515180 VCLP18206 1134 aa12.82□□□□□ -0.36
CDK7-212ENST00000515180 STIP1P31948 543 aaKnown RBP12.82□□□□□ -0.36
CDK7-212ENST00000515180 CXCR5P32302 372 aa12.82□□□□□ -0.36
CDK7-212ENST00000515180 CSTF2P33240 577 aaKnown RBP eCLIP12.82□□□□□ -0.36
CDK7-212ENST00000515180 ARSDP51689 593 aa12.82□□□□□ -0.36
CDK7-212ENST00000515180 EPHA4P54764 986 aa12.82□□□□□ -0.36
CDK7-212ENST00000515180 GFERP55789 205 aa12.82□□□□□ -0.36
CDK7-212ENST00000515180 TRA2AQ13595 282 aaKnown RBP eCLIP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms