RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 XRCC1P18887 633 aaPredicted RBP24.1■■□□□ 1.45
SNF8-213ENST00000514929 RPL10P27635 214 aaKnown RBP24.1■■□□□ 1.45
SNF8-213ENST00000514929 AKT1P31749 480 aa24.1■■□□□ 1.45
SNF8-213ENST00000514929 UBE2IP63279 158 aaKnown RBP24.1■■□□□ 1.45
SNF8-213ENST00000514929 SNAP47Q5SQN1 464 aa24.1■■□□□ 1.45
SNF8-213ENST00000514929 C11orf96Q7Z7L8 435 aa24.1■■□□□ 1.45
SNF8-213ENST00000514929 RASGEF1AQ8N9B8 481 aa24.1■■□□□ 1.45
SNF8-213ENST00000514929 UBE2Q2Q8WVN8 375 aa24.1■■□□□ 1.45
SNF8-213ENST00000514929 TMEM121Q9BTD3 319 aa24.1■■□□□ 1.45
SNF8-213ENST00000514929 TBC1D10AQ9BXI6 508 aa24.1■■□□□ 1.45
SNF8-213ENST00000514929 ASB8Q9H765 288 aa24.1■■□□□ 1.45
SNF8-213ENST00000514929 FEZ2Q9UHY8 353 aaPredicted RBP24.1■■□□□ 1.45
SNF8-213ENST00000514929 FKBPLQ9UIM3 349 aa24.1■■□□□ 1.45
SNF8-213ENST00000514929 ACSL6Q9UKU0 697 aa24.1■■□□□ 1.45
SNF8-213ENST00000514929 KCTD3Q9Y597 815 aa24.1■■□□□ 1.45
SNF8-213ENST00000514929 PTPRQQ9UMZ3 2332 aa24.1■■□□□ 1.45
SNF8-213ENST00000514929 CACNA1GO43497 2377 aa24.09■■□□□ 1.45
SNF8-213ENST00000514929 PRR19A6NJB7 356 aa24.09■■□□□ 1.45
SNF8-213ENST00000514929 KCNJ13O60928 360 aa24.09■■□□□ 1.45
SNF8-213ENST00000514929 METTL18O95568 372 aa24.09■■□□□ 1.45
SNF8-213ENST00000514929 MSH3P20585 1137 aa24.09■■□□□ 1.45
SNF8-213ENST00000514929 CA5AP35218 305 aa24.09■■□□□ 1.45
SNF8-213ENST00000514929 CTSCP53634 463 aa24.09■■□□□ 1.45
SNF8-213ENST00000514929 DRG2P55039 364 aaKnown RBP24.09■■□□□ 1.45
SNF8-213ENST00000514929 P3H1Q32P28 736 aa24.09■■□□□ 1.45
SNF8-213ENST00000514929 SOWAHCQ53LP3 525 aaPredicted RBP24.09■■□□□ 1.45
SNF8-213ENST00000514929 ARHGAP40Q5TG30 622 aa24.09■■□□□ 1.45
SNF8-213ENST00000514929 DENND5AQ6IQ26 1287 aa24.09■■□□□ 1.45
SNF8-213ENST00000514929 TMEM220Q6QAJ8 160 aa24.09■■□□□ 1.45
SNF8-213ENST00000514929 WDR74Q6RFH5 385 aaPredicted RBP24.09■■□□□ 1.45
SNF8-213ENST00000514929 ABRAXAS1Q6UWZ7 409 aa24.09■■□□□ 1.45
SNF8-213ENST00000514929 AMZ2Q86W34 360 aa24.09■■□□□ 1.45
SNF8-213ENST00000514929 KLHDC8BQ8IXV7 354 aa24.09■■□□□ 1.45
SNF8-213ENST00000514929 UBL7Q96S82 380 aaPredicted RBP24.09■■□□□ 1.45
SNF8-213ENST00000514929 EPB41L1Q9H4G0 881 aa24.09■■□□□ 1.45
SNF8-213ENST00000514929 ARNT2Q9HBZ2 717 aa24.09■■□□□ 1.45
SNF8-213ENST00000514929 ZNF624Q9P2J8 865 aaPredicted RBP24.09■■□□□ 1.45
SNF8-213ENST00000514929 TEX51A0A1B0GUA7 166 aa24.08■■□□□ 1.45
SNF8-213ENST00000514929 LILRA5A6NI73 299 aa24.08■■□□□ 1.45
SNF8-213ENST00000514929 OR2AG2A6NM03 316 aa24.08■■□□□ 1.45
SNF8-213ENST00000514929 C9orf172C9J069 976 aa24.08■■□□□ 1.45
SNF8-213ENST00000514929 POP7O75817 140 aaKnown RBP24.08■■□□□ 1.45
SNF8-213ENST00000514929 SRP72O76094 671 aaKnown RBP24.08■■□□□ 1.45
SNF8-213ENST00000514929 SLC19A1P41440 591 aa24.08■■□□□ 1.45
SNF8-213ENST00000514929 HALP42357 657 aa24.08■■□□□ 1.45
SNF8-213ENST00000514929 GDF10P55107 478 aa24.08■■□□□ 1.45
SNF8-213ENST00000514929 LONRF2Q1L5Z9 754 aa24.08■■□□□ 1.45
SNF8-213ENST00000514929 AGAP9Q5VTM2 703 aa24.08■■□□□ 1.45
SNF8-213ENST00000514929 WASH2PQ6VEQ5 465 aa24.08■■□□□ 1.45
SNF8-213ENST00000514929 OR13C4Q8NGS5 318 aa24.08■■□□□ 1.45
SNF8-213ENST00000514929 ATG4AQ8WYN0 398 aa24.08■■□□□ 1.45
SNF8-213ENST00000514929 LRRC40Q9H9A6 602 aa24.08■■□□□ 1.45
SNF8-213ENST00000514929 WASH6PQ9NQA3 447 aa24.08■■□□□ 1.45
SNF8-213ENST00000514929 FOXJ2Q9P0K8 574 aa24.08■■□□□ 1.45
SNF8-213ENST00000514929 SSUH2Q9Y2M2 353 aa24.08■■□□□ 1.45
SNF8-213ENST00000514929 BPTFQ12830 3046 aa24.08■■□□□ 1.45
SNF8-213ENST00000514929 IGSF10Q6WRI0 2623 aa24.08■■□□□ 1.44
SNF8-213ENST00000514929 LOC400499M0QZD8 3231 aa24.07■■□□□ 1.44
SNF8-213ENST00000514929 ZNF106Q9H2Y7 1883 aaKnown RBP24.07■■□□□ 1.44
SNF8-213ENST00000514929 A8MU76 341 aa24.07■■□□□ 1.44
SNF8-213ENST00000514929 LIPCP11150 499 aa24.07■■□□□ 1.44
SNF8-213ENST00000514929 FGF3P11487 239 aaPredicted RBP24.07■■□□□ 1.44
SNF8-213ENST00000514929 BRAFP15056 766 aa24.07■■□□□ 1.44
SNF8-213ENST00000514929 HADHAP40939 763 aa24.07■■□□□ 1.44
SNF8-213ENST00000514929 TMPRSS15P98073 1019 aa24.07■■□□□ 1.44
SNF8-213ENST00000514929 VAC14Q08AM6 782 aa24.07■■□□□ 1.44
SNF8-213ENST00000514929 MSLNQ13421 630 aaPredicted RBP24.07■■□□□ 1.44
SNF8-213ENST00000514929 KCTD11Q693B1 232 aa24.07■■□□□ 1.44
SNF8-213ENST00000514929 TMEM26Q6ZUK4 368 aa24.07■■□□□ 1.44
SNF8-213ENST00000514929 DET1Q7L5Y6 550 aa24.07■■□□□ 1.44
SNF8-213ENST00000514929 TAB3Q8N5C8 712 aaPredicted RBP24.07■■□□□ 1.44
SNF8-213ENST00000514929 CXorf40BQ96DE9 158 aa24.07■■□□□ 1.44
SNF8-213ENST00000514929 ZNF514Q96K75 400 aaPredicted RBP24.07■■□□□ 1.44
SNF8-213ENST00000514929 BBC3Q96PG8 261 aaPredicted RBP24.07■■□□□ 1.44
SNF8-213ENST00000514929 TAAR9Q96RI9 348 aa24.07■■□□□ 1.44
SNF8-213ENST00000514929 UCK1Q9HA47 277 aa24.07■■□□□ 1.44
SNF8-213ENST00000514929 POT1Q9NUX5 634 aa24.07■■□□□ 1.44
SNF8-213ENST00000514929 PDP2Q9P2J9 529 aa24.07■■□□□ 1.44
SNF8-213ENST00000514929 CRLS1Q9UJA2 301 aa24.07■■□□□ 1.44
SNF8-213ENST00000514929 DNMT3AQ9Y6K1 912 aaPredicted RBP24.07■■□□□ 1.44
SNF8-213ENST00000514929 OR52A4PA6NMU1 304 aa24.06■■□□□ 1.44
SNF8-213ENST00000514929 PSMD3O43242 534 aa24.06■■□□□ 1.44
SNF8-213ENST00000514929 CCDC175P0C221 793 aa24.06■■□□□ 1.44
SNF8-213ENST00000514929 PBLDP30039 288 aaPredicted RBP24.06■■□□□ 1.44
SNF8-213ENST00000514929 ZNF140P52738 457 aaPredicted RBP24.06■■□□□ 1.44
SNF8-213ENST00000514929 DMPKQ09013 629 aa24.06■■□□□ 1.44
SNF8-213ENST00000514929 RPS6KA1Q15418 735 aa24.06■■□□□ 1.44
SNF8-213ENST00000514929 TGIF1Q15583 401 aa24.06■■□□□ 1.44
SNF8-213ENST00000514929 FNBP1LQ5T0N5 605 aa24.06■■□□□ 1.44
SNF8-213ENST00000514929 CCDC81Q6ZN84 652 aa24.06■■□□□ 1.44
SNF8-213ENST00000514929 ZFAND4Q86XD8 727 aa24.06■■□□□ 1.44
SNF8-213ENST00000514929 FAM129CQ86XR2 697 aa24.06■■□□□ 1.44
SNF8-213ENST00000514929 CCNL2Q96S94 520 aaPredicted RBP24.06■■□□□ 1.44
SNF8-213ENST00000514929 FRMD8P1Q9BZ68 369 aaPredicted RBP24.06■■□□□ 1.44
SNF8-213ENST00000514929 B3GNT4Q9C0J1 378 aa24.06■■□□□ 1.44
SNF8-213ENST00000514929 KLHL3Q9UH77 587 aa24.06■■□□□ 1.44
SNF8-213ENST00000514929 PCDHB11Q9Y5F2 797 aa24.06■■□□□ 1.44
SNF8-213ENST00000514929 EIF4E1BA6NMX2 242 aaKnown RBP24.05■■□□□ 1.44
SNF8-213ENST00000514929 CD82P27701 267 aa24.05■■□□□ 1.44
SNF8-213ENST00000514929 XIAPP98170 497 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms