RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 OR14J1Q9UGF5 321 aa3.14□□□□□ -1.91
NEDD4-211ENST00000514893 ASTN2O75129 1339 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-211ENST00000514893 IGHV4-61A0A0C4DH41 118 aa3.13□□□□□ -1.91
NEDD4-211ENST00000514893 NBNO60934 754 aa3.13□□□□□ -1.91
NEDD4-211ENST00000514893 IGHV4-59P01825 116 aa3.13□□□□□ -1.91
NEDD4-211ENST00000514893 CAPN2P17655 700 aa3.13□□□□□ -1.91
NEDD4-211ENST00000514893 HNRNPDQ14103 355 aaKnown RBP3.13□□□□□ -1.91
NEDD4-211ENST00000514893 PDCD2Q16342 344 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-211ENST00000514893 HSP90AB2PQ58FF8 381 aa3.13□□□□□ -1.91
NEDD4-211ENST00000514893 LCN10Q6JVE6 187 aa3.13□□□□□ -1.91
NEDD4-211ENST00000514893 FAM198BQ6UWH4 519 aa3.13□□□□□ -1.91
NEDD4-211ENST00000514893 GPRIN3Q6ZVF9 776 aa3.13□□□□□ -1.91
NEDD4-211ENST00000514893 LRRC8DQ7L1W4 858 aa3.13□□□□□ -1.91
NEDD4-211ENST00000514893 NGEFQ8N5V2 710 aa3.13□□□□□ -1.91
NEDD4-211ENST00000514893 SLC5A8Q8N695 610 aa3.13□□□□□ -1.91
NEDD4-211ENST00000514893 SOSTQ9BQB4 213 aa3.13□□□□□ -1.91
NEDD4-211ENST00000514893 GLIS2Q9BZE0 524 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-211ENST00000514893 ZNF700Q9H0M5 742 aa3.13□□□□□ -1.91
NEDD4-211ENST00000514893 SLC25A18Q9H1K4 315 aa3.13□□□□□ -1.91
NEDD4-211ENST00000514893 EPHA6Q9UF33 1036 aa3.13□□□□□ -1.91
NEDD4-211ENST00000514893 LRRC53A6NM62 1247 aa3.12□□□□□ -1.91
NEDD4-211ENST00000514893 PLIN1O60240 522 aa3.12□□□□□ -1.91
NEDD4-211ENST00000514893 ACADMP11310 421 aa3.12□□□□□ -1.91
NEDD4-211ENST00000514893 CTSCP53634 463 aa3.12□□□□□ -1.91
NEDD4-211ENST00000514893 NECTIN1Q15223 517 aa3.12□□□□□ -1.91
NEDD4-211ENST00000514893 SLC16A9Q7RTY1 509 aa3.12□□□□□ -1.91
NEDD4-211ENST00000514893 PTOV1Q86YD1 416 aa3.12□□□□□ -1.91
NEDD4-211ENST00000514893 GTF3AQ92664 365 aaKnown RBP3.12□□□□□ -1.91
NEDD4-211ENST00000514893 SLC47A1Q96FL8 570 aa3.12□□□□□ -1.91
NEDD4-211ENST00000514893 KLHL15Q96M94 604 aa3.12□□□□□ -1.91
NEDD4-211ENST00000514893 SEMA3CQ99985 751 aa3.12□□□□□ -1.91
NEDD4-211ENST00000514893 RPP25Q9BUL9 199 aaKnown RBP3.12□□□□□ -1.91
NEDD4-211ENST00000514893 CLEC7AQ9BXN2 247 aa3.12□□□□□ -1.91
NEDD4-211ENST00000514893 UPF3AQ9H1J1 476 aaKnown RBP3.12□□□□□ -1.91
NEDD4-211ENST00000514893 UBA2Q9UBT2 640 aaPredicted RBP3.12□□□□□ -1.91
NEDD4-211ENST00000514893 ZNF318Q5VUA4 2279 aa3.12□□□□□ -1.91
NEDD4-211ENST00000514893 BCL2L11O43521 198 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 WISP2O76076 250 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 CHKAP35790 457 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 PSMC2P35998 433 aaKnown RBP3.11□□□□□ -1.91
NEDD4-211ENST00000514893 LIMK2P53671 638 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 DCTN2Q13561 401 aaKnown RBP3.11□□□□□ -1.91
NEDD4-211ENST00000514893 TDGQ13569 410 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 KCNC3Q14003 757 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 PDE1CQ14123 709 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-211ENST00000514893 FGFBP1Q14512 234 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 COL28A1Q2UY09 1125 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 WLSQ5T9L3 541 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 ATG16L1Q676U5 607 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 CCDC13Q8IYE1 715 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 MYCT1Q8N699 235 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 EMC1Q8N766 993 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 IGSF8Q969P0 613 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 TTYH1Q9H313 450 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-211ENST00000514893 ASAH2Q9NR71 780 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 PPP1R14DQ9NXH3 145 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 ERAP1Q9NZ08 941 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 FLRT3Q9NZU0 649 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 SLC25A10Q9UBX3 287 aaPredicted RBP3.11□□□□□ -1.91
NEDD4-211ENST00000514893 STK39Q9UEW8 545 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 ZDHHC2Q9UIJ5 367 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 RIPOR2Q9Y4F9 1068 aa3.11□□□□□ -1.91
NEDD4-211ENST00000514893 IFNL4K9M1U5 179 aa3.1□□□□□ -1.91
NEDD4-211ENST00000514893 MLYCDO95822 493 aa3.1□□□□□ -1.91
NEDD4-211ENST00000514893 ZNF182P17025 639 aaPredicted RBP3.1□□□□□ -1.91
NEDD4-211ENST00000514893 CAMK1Q14012 370 aa3.1□□□□□ -1.91
NEDD4-211ENST00000514893 TAF5Q15542 800 aa3.1□□□□□ -1.91
NEDD4-211ENST00000514893 MAP3K21Q5TCX8 1036 aa3.1□□□□□ -1.91
NEDD4-211ENST00000514893 NAA35Q5VZE5 725 aa3.1□□□□□ -1.91
NEDD4-211ENST00000514893 ATG9AQ7Z3C6 839 aa3.1□□□□□ -1.91
NEDD4-211ENST00000514893 PM20D2Q8IYS1 436 aa3.1□□□□□ -1.91
NEDD4-211ENST00000514893 SMPDL3BQ92485 455 aa3.1□□□□□ -1.91
NEDD4-211ENST00000514893 SUSD6Q92537 303 aa3.1□□□□□ -1.91
NEDD4-211ENST00000514893 PPP1R13BQ96KQ4 1090 aa3.1□□□□□ -1.91
NEDD4-211ENST00000514893 TMEM68Q96MH6 324 aa3.1□□□□□ -1.91
NEDD4-211ENST00000514893 PITPNM3Q9BZ71 974 aa3.1□□□□□ -1.91
NEDD4-211ENST00000514893 MPP6Q9NZW5 540 aa3.1□□□□□ -1.91
NEDD4-211ENST00000514893 PRRC2AP48634 2157 aaKnown RBP3.1□□□□□ -1.91
NEDD4-211ENST00000514893 SHROOM4Q9ULL8 1493 aa3.09□□□□□ -1.91
NEDD4-211ENST00000514893 FAM237AA0A1B0GTK4 181 aa3.09□□□□□ -1.91
NEDD4-211ENST00000514893 EIF4E1BA6NMX2 242 aaKnown RBP3.09□□□□□ -1.91
NEDD4-211ENST00000514893 CDC123O75794 336 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-211ENST00000514893 ITIH1P19827 911 aa3.09□□□□□ -1.91
NEDD4-211ENST00000514893 ARL4CP56559 192 aa3.09□□□□□ -1.91
NEDD4-211ENST00000514893 HUNKP57058 714 aa3.09□□□□□ -1.91
NEDD4-211ENST00000514893 TRA2BP62995 288 aaKnown RBP3.09□□□□□ -1.91
NEDD4-211ENST00000514893 CDR2Q01850 454 aa3.09□□□□□ -1.91
NEDD4-211ENST00000514893 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.09□□□□□ -1.91
NEDD4-211ENST00000514893 GSTA3Q16772 222 aa3.09□□□□□ -1.91
NEDD4-211ENST00000514893 FBXO47Q5MNV8 452 aa3.09□□□□□ -1.91
NEDD4-211ENST00000514893 CYP4A22Q5TCH4 519 aa3.09□□□□□ -1.91
NEDD4-211ENST00000514893 BBS12Q6ZW61 710 aa3.09□□□□□ -1.91
NEDD4-211ENST00000514893 GSTA5Q7RTV2 222 aa3.09□□□□□ -1.91
NEDD4-211ENST00000514893 GPALPP1Q8IXQ4 340 aa3.09□□□□□ -1.91
NEDD4-211ENST00000514893 RAB42Q8N4Z0 105 aa3.09□□□□□ -1.91
NEDD4-211ENST00000514893 OR1J2Q8NGS2 313 aa3.09□□□□□ -1.91
NEDD4-211ENST00000514893 KRT12Q99456 494 aa3.09□□□□□ -1.91
NEDD4-211ENST00000514893 TMEM39BQ9GZU3 492 aa3.09□□□□□ -1.91
NEDD4-211ENST00000514893 MAGIXQ9H6Y5 334 aa3.09□□□□□ -1.91
NEDD4-211ENST00000514893 SLC28A3Q9HAS3 691 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms