RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 ABTB1Q969K4 478 aaPredicted RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 KCTD15Q96SI1 283 aaPredicted RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 GMLQ99445 158 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 PELOQ9BRX2 385 aaKnown RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 BCL2L14Q9BZR8 327 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 OR2AG1Q9H205 316 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 IL25Q9H293 177 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ZNF304Q9HCX3 659 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 MARK1Q9P0L2 795 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 PSMD13Q9UNM6 376 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 LYVE1Q9Y5Y7 322 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 MRPL42Q9Y6G3 142 aaKnown RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 MTMR11A4FU01 709 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 OR2AG2A6NM03 316 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ZNF726A6NNF4 738 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 KHNYNO15037 678 aaKnown RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 SLC7A4O43246 635 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 LILRB3O75022 631 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 LRIG2O94898 1065 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 SNAI1O95863 264 aaPredicted RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 TRBC1P01850 177 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ALPPP05187 535 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 HEXBP07686 556 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ERCC1P07992 297 aaPredicted RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 CTSAP10619 480 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 PRPS2P11908 318 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 IDO1P14902 403 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 CCNA2P20248 432 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 DSC2Q02487 901 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 CREB5Q02930 508 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 GSTM4Q03013 218 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 RNASEH2BQ5TBB1 312 aaKnown RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 LIPMQ5VYY2 423 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 KDM7AQ6ZMT4 941 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ARCQ7LC44 396 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ZNF786Q8N393 782 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 PHF10Q8WUB8 498 aaKnown RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 EEF1AKMT1Q8WVE0 214 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 MTMR8Q96EF0 704 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 RPL10LQ96L21 214 aaKnown RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 TOX2Q96NM4 488 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 TBL1XR1Q9BZK7 514 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ADAMTS10Q9H324 1103 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 MMADHCQ9H3L0 296 aaPredicted RBP4.21□□□□□ -1.74
VCAN-209ENST00000513016 KLC4Q9NSK0 619 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 NKIRAS2Q9NYR9 191 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 ACSL5Q9ULC5 683 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 TCAF1Q9Y4C2 921 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 PCDHGC4Q9Y5F7 938 aa4.21□□□□□ -1.74
VCAN-209ENST00000513016 IGLV3-22A0A075B6J6 115 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 TP53I11O14683 189 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 RGS5O15539 181 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 CFHP08603 1231 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 CBSLP0DN79 551 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 CBSP35520 551 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 TXNDC8Q6A555 127 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 WDR93Q6P2C0 686 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 DNAJC14Q6Y2X3 702 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 RANBP3LQ86VV4 465 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 DCP2Q8IU60 420 aaKnown RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 CACTIN-AS1Q8N1I8 211 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 HORMAD2Q8N7B1 307 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 JOSD2Q8TAC2 188 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 TCP10LQ8TDR4 215 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 ANKRD7Q92527 254 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 SLC9A6Q92581 669 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 ELMO3Q96BJ8 720 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 QKIQ96PU8 341 aaKnown RBP eCLIP4.2□□□□□ -1.74
VCAN-209ENST00000513016 LGMNQ99538 433 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 NDNQ99608 321 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 RTP3Q9BQQ7 232 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 LRRC19Q9H756 370 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 PTGES2Q9H7Z7 377 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 LRTM1Q9HBL6 345 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 SPHK2Q9NRA0 654 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 GDAP2Q9NXN4 497 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 KCNK4Q9NYG8 393 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 CD84Q9UIB8 345 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 CYP8B1Q9UNU6 501 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 STON1Q9Y6Q2 735 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 FAM237BA0A1B0GVD1 139 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 PRORSD1PA6NEY8 169 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 LIN7AO14910 233 aaPredicted RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 DHX15O43143 795 aaKnown RBP4.2□□□□□ -1.74
VCAN-209ENST00000513016 AP2A1O95782 977 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 CER1O95813 267 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 GNAZP19086 355 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 ITPKAP23677 461 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 COX10Q12887 443 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 BNIP2Q12982 314 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 TMPRSS6Q8IU80 811 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 ZNF276Q8N554 614 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 KCTD4Q8WVF5 259 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 CAVIN3Q969G5 261 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 TMEM209Q96SK2 561 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 LPIN3Q9BQK8 851 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 FAM192AQ9GZU8 254 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 EBF3Q9H4W6 596 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 ERVK-5Q9HDB9 667 aa4.2□□□□□ -1.74
VCAN-209ENST00000513016 ZNF490Q9ULM2 529 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms