RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 VASH1Q7L8A9 365 aaPredicted RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 ZNF571Q7Z3V5 609 aaPredicted RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 RANBP3LQ86VV4 465 aaPredicted RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 MAP4K3Q8IVH8 894 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 GPALPP1Q8IXQ4 340 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 COX18Q8N8Q8 333 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 FAM46DQ8NEK8 389 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 KBTBD8Q8NFY9 601 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 CYP2W1Q8TAV3 490 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 TP53INP1Q96A56 240 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 SIPA1Q96FS4 1042 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 TSPAN18Q96SJ8 248 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 EBNA1BP2Q99848 306 aaKnown RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 NOD2Q9HC29 1040 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 GPN1Q9HCN4 374 aaPredicted RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 SDHAF3Q9NRP4 125 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 TDP1Q9NUW8 608 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 ARHGAP20Q9P2F6 1191 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 CNOT6Q9ULM6 557 aaKnown RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 PCDHB1Q9Y5F3 818 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 OR2AG2A6NM03 316 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 A8MUA0 341 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 CST1P01037 141 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 PBX1P40424 430 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 PKNOX1P55347 436 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 LRP8Q14114 963 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 MED22Q15528 200 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 FAM110CQ1W6H9 321 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 TOR1AIP1Q5JTV8 583 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 SULT1C3Q6IMI6 304 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 QSOX2Q6ZRP7 698 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 C12orf56Q8IXR9 622 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 SAMD14Q8IZD0 417 aaPredicted RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 TOP6BLQ8N6T0 577 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 ATAD1Q8NBU5 361 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 KLHL6Q8WZ60 621 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 CERS2Q96G23 380 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 C12orf66Q96MD2 445 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 ZSWIM3Q96MP5 696 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 C1orf50Q9BV19 199 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 GSDMCQ9BYG8 508 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 SLC40A1Q9NP59 571 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 CALML5Q9NZT1 146 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 C19orf25Q9UFG5 118 aaPredicted RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 FAM198AQ9UFP1 575 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 DDX20Q9UHI6 824 aaKnown RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 CD84Q9UIB8 345 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 TBC1D24Q9ULP9 559 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 ING4Q9UNL4 249 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 A0A087WXM4 84 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 ARL5CA6NH57 179 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 BTNL10A8MVZ5 291 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 PRMT5O14744 637 aaPredicted RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 LGR5O75473 907 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 MMP3P08254 477 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 ZNF806P0C7X5 589 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 DBTP11182 482 aaKnown RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 DRD4P21917 467 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 PRKCIP41743 596 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 ASMTP46597 345 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 DUSP3P51452 185 aaPredicted RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 RAB10P61026 200 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 CRADDP78560 199 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 PUM1Q14671 1186 aaKnown RBP eCLIP5.73□□□□□ -1.49
USP38-203ENST00000511739 ZIK1Q3SY52 487 aaPredicted RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 KLHL26Q53HC5 615 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 FUT10Q6P4F1 479 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 DCAKDQ8WVC6 231 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 RFT1Q96AA3 541 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 OXNAD1Q96HP4 312 aaPredicted RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 KLHL5Q96PQ7 755 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 CDT1Q9H211 546 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 LRMDAQ9H2I8 198 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 GMIPQ9P107 970 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 L1RE1Q9UN81 338 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 C2CD2Q9Y426 696 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 CNTNAP1P78357 1384 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 SIGLEC16A6NMB1 481 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 MUSKO15146 869 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 ERCC1P07992 297 aaPredicted RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 PRKAR1AP10644 381 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 ZNF20P17024 532 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 GJA1P17302 382 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 FGFR3P22607 806 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 RBMS1P29558 406 aaKnown RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 GRIA3P42263 894 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 SNAPC1Q16533 368 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 ABCA11PQ4W5N1 156 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 RNASE12Q5GAN4 147 aaKnown RBP5.73□□□□□ -1.49
USP38-203ENST00000511739 BICRALQ6AI39 1079 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 HFE2Q6ZVN8 426 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 SYVN1Q86TM6 617 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 CRYBG2Q8N1P7 616 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 AVL9Q8NBF6 648 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 C11orf65Q8NCR3 313 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 OR7A2PQ8NGA2 310 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 OR10Q1Q8NGQ4 319 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 DENND1AQ8TEH3 1009 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 KCNJ9Q92806 393 aa5.73□□□□□ -1.49
USP38-203ENST00000511739 APOLD1Q96LR9 279 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms