RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 FAM83HQ6ZRV2 1179 aaPredicted RBP3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 DZIP1Q86YF9 867 aaKnown RBP3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 CAMK1DQ8IU85 385 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 ARMC8Q8IUR7 673 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 HORMAD2Q8N7B1 307 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 DEFB124Q8NES8 71 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 ZMIZ2Q8NF64 920 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 ENGASEQ8NFI3 743 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 SLC25A28Q96A46 364 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 CFAP53Q96M91 514 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 MYADMQ96S97 322 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 KLHL31Q9H511 634 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 PCDHGA5Q9Y5G8 931 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 PTPRQQ9UMZ3 2332 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 POLQO75417 2590 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 GREB1Q4ZG55 1949 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 MIA3Q5JRA6 1907 aa3.68□□□□□ -1.82
TOPBP1-208ENST00000511439 ZFHX3Q15911 3703 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 DOPEY2Q9Y3R5 2298 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 PABPN1LA6NDY0 278 aaKnown RBP3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 B4E171 279 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 STMND1H3BQB6 276 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 TSPAN4O14817 238 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 MBD4O95243 580 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 IGKV5-2P06315 115 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 TGFB3P10600 412 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 TDGF1P13385 188 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 CHRNB2P17787 502 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 RFC1P35251 1148 aaPredicted RBP3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 TSPAN7P41732 249 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 GPR12P47775 334 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 POLD2P49005 469 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 CCR3P51677 355 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 TMPRSS3P57727 454 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 EFNB1P98172 346 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 PTP4A2Q12974 167 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 PTGR1Q14914 329 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 ODF3L2Q3SX64 289 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 RARS2Q5T160 578 aaKnown RBP3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 FAM69AQ5T7M9 428 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 INO80CQ6PI98 192 aaPredicted RBP3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 ATF7IPQ6VMQ6 1270 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 SLC16A12Q6ZSM3 486 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 H1FNTQ75WM6 255 aaPredicted RBP3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 CHD1LQ86WJ1 897 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 CHCHD4Q8N4Q1 142 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 NOC3LQ8WTT2 800 aaKnown RBP3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 APBB2Q92870 758 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 WBP1Q96G27 269 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 NLRP4Q96MN2 994 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 DNAJC18Q9H819 358 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 WDR6Q9NNW5 1121 aaKnown RBP3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 TMEM9BQ9NQ34 198 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 SIRT3Q9NTG7 399 aaPredicted RBP3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 IL1RAPL1Q9NZN1 696 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 PEMTQ9UBM1 199 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 NAALADL1Q9UQQ1 740 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 PCDHGB5Q9Y5G0 923 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 ASXL3Q9C0F0 2248 aa3.67□□□□□ -1.82
TOPBP1-208ENST00000511439 ABCA2Q9BZC7 2435 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 PCNX1Q96RV3 2341 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 TRIP12Q14669 1992 aaPredicted RBP3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 SHROOM3Q8TF72 1996 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 SCN10AQ9Y5Y9 1956 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 A0A096LPK6 155 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 ARHGAP10A1A4S6 786 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 CBY3A6NI87 242 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 RSPH10B2B2RC85 870 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 SPTLC2O15270 562 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 RSPH10BP0C881 870 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 ENO3P13929 434 aaPredicted RBP3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 COX7A2P14406 83 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 TNFRSF8P28908 595 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 ADSSP30520 456 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 AVPR1AP37288 418 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 CDKN2AP42771 156 aaKnown RBP3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 PPP3CCP48454 512 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 SELENOVP59797 346 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 UFM1P61960 85 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 CYP4A11Q02928 519 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 SRSF5Q13243 272 aaKnown RBP3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 RALBP1Q15311 655 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 MLF2Q15773 248 aaPredicted RBP3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 KRT24Q2M2I5 525 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 PRTGQ2VWP7 1150 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 EDRF1Q3B7T1 1238 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 WASHC2DQ5SRD0 308 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 PLPP4Q5VZY2 271 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 NCAPH2Q6IBW4 605 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 CCNI2Q6ZMN8 369 aaPredicted RBP3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 MOB3CQ70IA8 216 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 MAATS1Q7Z4T9 603 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 FAM160B2Q86V87 743 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 LONP2Q86WA8 852 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 FOXP4Q8IVH2 680 aaPredicted RBP3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 MCPH1Q8NEM0 835 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 PPHLN1Q8NEY8 458 aaKnown RBP3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 RASSF8Q8NHQ8 419 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 NFKBIDQ8NI38 313 aa3.66□□□□□ -1.82
TOPBP1-208ENST00000511439 GABPB2Q8TAK5 448 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms