RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 TCP1P17987 556 aaKnown RBP13.74□□□□□ -0.21
DDX41-212ENST00000511040 VCLP18206 1134 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 ADRA1DP25100 572 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 MAPK9P45984 424 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 CLCNKAP51800 687 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 HHEXQ03014 270 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 CACNG1Q06432 222 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 NFE2L1Q14494 772 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 MAP9Q49MG5 647 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 C3orf38Q5JPI3 329 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 ANKRD22Q5VYY1 191 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 FOXR1Q6PIV2 292 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 TMPRSS9Q7Z410 1059 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 AMZ2Q86W34 360 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 PIANPQ8IYJ0 282 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 PPHLN1Q8NEY8 458 aaKnown RBP13.74□□□□□ -0.21
DDX41-212ENST00000511040 OR13J1Q8NGT2 312 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 WDR48Q8TAF3 677 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 HDAC10Q969S8 669 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 RANBP9Q96S59 729 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 SLC38A3Q99624 504 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 COPS8Q99627 209 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 NAPGQ99747 312 aaPredicted RBP13.74□□□□□ -0.21
DDX41-212ENST00000511040 NUDT22Q9BRQ3 303 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 EPB41L5Q9HCM4 733 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 KCNK4Q9NYG8 393 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 CPNE7Q9UBL6 633 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 SATB2Q9UPW6 733 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 WDR37Q9Y2I8 494 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 TCAF1Q9Y4C2 921 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 MAP1BP46821 2468 aaKnown RBP13.74□□□□□ -0.21
DDX41-212ENST00000511040 UNC13CQ8NB66 2214 aa13.74□□□□□ -0.21
DDX41-212ENST00000511040 CTAGE9A4FU28 777 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 PRR19A6NJB7 356 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 OR52A4PA6NMU1 304 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 AGAP14A8MT82 685 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 H7C0S8 307 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 FANCGO15287 622 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 SGTAO43765 313 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 BRINP1O60477 761 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 GOT2P00505 430 aaKnown RBP13.73□□□□□ -0.21
DDX41-212ENST00000511040 RALBP11234 206 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 SLC2A4P14672 509 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 BRAFP15056 766 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 TPSB2P20231 275 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 IDSP22304 550 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 MPSTP25325 297 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 PSMA3P25788 255 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 ACRV1P26436 265 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 MGAT1P26572 445 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 CD1CP29017 333 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 FASLGP48023 281 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 INHBCP55103 352 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 GABREP78334 506 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 KCNJ11Q14654 390 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 NR1D2Q14995 579 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 RTP5Q14D33 572 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 TPSAB1Q15661 275 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 DBN1Q16643 649 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 GPR33Q49SQ1 333 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.73□□□□□ -0.21
DDX41-212ENST00000511040 PAPD7Q5XG87 772 aaKnown RBP13.73□□□□□ -0.21
DDX41-212ENST00000511040 ZNF534Q76KX8 674 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 SLC9B2Q86UD5 537 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 TRIM48Q8IWZ4 208 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 OR6P1Q8NGX9 317 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 C19orf43Q9BQ61 176 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 NRSN2Q9GZP1 204 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 ZMYND15Q9H091 742 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 DDX47Q9H0S4 455 aaKnown RBP13.73□□□□□ -0.21
DDX41-212ENST00000511040 SEMA6CQ9H3T2 930 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 CHRAC1Q9NRG0 131 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 SYBUQ9NX95 663 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 ZDHHC3Q9NYG2 299 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 ZNF624Q9P2J8 865 aaPredicted RBP13.73□□□□□ -0.21
DDX41-212ENST00000511040 PSMD13Q9UNM6 376 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 NEU2Q9Y3R4 380 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 KIF26BQ2KJY2 2108 aa13.73□□□□□ -0.21
DDX41-212ENST00000511040 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.72□□□□□ -0.21
DDX41-212ENST00000511040 IGHV1OR21-1A0A087WYE8 117 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 TRBV5-4A0A0C4DH59 114 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 KIR2DS5A0A0G2JLQ3 304 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 A0A0G2JNG1 304 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 CFAP99D6REC4 459 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 GOLGA8MH3BSY2 632 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 KIR2DS3K7RE56 304 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 AVILO75366 819 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 ATP1B2P14415 290 aaPredicted RBP13.72□□□□□ -0.21
DDX41-212ENST00000511040 HOXB3P14651 431 aaPredicted RBP13.72□□□□□ -0.21
DDX41-212ENST00000511040 FOXN2P32314 431 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 CSF2RBP32927 897 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 SLC19A1P41440 591 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 GPR3P46089 330 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 FNTAP49354 379 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 UBE2IP63279 158 aaKnown RBP13.72□□□□□ -0.21
DDX41-212ENST00000511040 LAMB3Q13751 1172 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 KIR2DS5Q14953 304 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 CLCA4Q14CN2 919 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 BCL7AQ4VC05 210 aa13.72□□□□□ -0.21
DDX41-212ENST00000511040 PCID2Q5JVF3 399 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms