RNA–Protein interactions for RNA: ENST00000510817.1

TMEM173-208, Transcript of transmembrane protein 173, human

TSL 2

Gene TMEM173, Length 901 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM173-208	ENST00000510817	TUBB4B	P68371	445 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	PDE1B	Q01064	536 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	TUBB2A	Q13885	445 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	SYCP1	Q15431	976 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	QPCT	Q16769	361 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	ANKRD20A8P	Q5CZ79	823 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	ZNF648	Q5T619	568 aa	Predicted RBP	13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	CDKAL1	Q5VV42	579 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	PDPK2P	Q6A1A2	396 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	LCN10	Q6JVE6	187 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	IRGC	Q6NXR0	463 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	PPP1R2P3	Q6NXS1	205 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	CERS6	Q6ZMG9	384 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	IRF2BP2	Q7Z5L9	587 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	CISD2	Q8N5K1	135 aa	Known RBP	13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	OR8K5	Q8NH50	307 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	TUBB2B	Q9BVA1	445 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	NLN	Q9BYT8	704 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	OSGEPL1	Q9H4B0	414 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	GPR83	Q9NYM4	423 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	PKD2L2	Q9NZM6	624 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	B3GNT3	Q9Y2A9	372 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	WDR37	Q9Y2I8	494 aa		13.35	□□□□□ -0.27
TMEM173-208	ENST00000510817	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	CROCC	Q5TZA2	2017 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	CELSR1	Q9NYQ6	3014 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	C1orf232	A0A0U1RR37	186 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	ANKRD66	B4E2M5	251 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	ZNF185	O15231	689 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	VEGFD	O43915	354 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	MTA2	O94776	668 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	SLC25A14	O95258	325 aa	Predicted RBP	13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	GSDMD	P57764	484 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	DCDC1	P59894	354 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	HSD11B2	P80365	405 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	DSC2	Q02487	901 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	NIPAL4	Q0D2K0	466 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	KRT31	Q15323	416 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	BOLA3	Q53S33	107 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	VWA5B1	Q5TIE3	1220 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	DSEL	Q8IZU8	1212 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	INPP5D	Q92835	1189 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	MR1	Q95460	341 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	GLYATL1	Q969I3	302 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	MARVELD3	Q96A59	401 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	MOCOS	Q96EN8	888 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	CD180	Q99467	661 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	MAP3K3	Q99759	626 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	ZSCAN5A	Q9BUG6	496 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	PCDH9	Q9HC56	1237 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	ARFGAP3	Q9NP61	516 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	KCND1	Q9NSA2	647 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	SEPT11	Q9NVA2	429 aa	Known RBP	13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	G3BP2	Q9UN86	482 aa	Known RBP	13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	NTNG1	Q9Y2I2	539 aa		13.34	□□□□□ -0.27
TMEM173-208	ENST00000510817	HIVEP1	P15822	2718 aa		13.33	□□□□□ -0.27
TMEM173-208	ENST00000510817	PDZK1P1	A8MUH7	402 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	MEN1	O00255	615 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	MATN3	O15232	486 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	SCRG1	O75711	98 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	TCF4	P15884	667 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	IDS	P22304	550 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	RPL10	P27635	214 aa	Known RBP	13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	SERPINB6	P35237	376 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	ARL4A	P40617	200 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	GALNT2	Q10471	571 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	INSC	Q1MX18	579 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	KRTAP21-3	Q3LHN1	58 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	KHDC1	Q4VXA5	237 aa	Known RBP	13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	TDRD12	Q587J7	1177 aa	Known RBP	13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	CRTC3	Q6UUV7	619 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	LRRTM4	Q86VH4	590 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	CARF	Q8N187	725 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	TRAM1L1	Q8N609	369 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	ENDOV	Q8N8Q3	282 aa	Known RBP	13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	ST6GALNAC3	Q8NDV1	305 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	GPR26	Q8NDV2	337 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	FAM71B	Q8TC56	605 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	ENOX1	Q8TC92	643 aa	Known RBP	13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	CCHCR1	Q8TD31	782 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	TSGA13	Q96PP4	275 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	NUP85	Q9BW27	656 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	TMPRSS11E	Q9UL52	423 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	SNX7	Q9UNH6	387 aa		13.33	□□□□□ -0.28
TMEM173-208	ENST00000510817	SEC16A	O15027	2179 aa		13.32	□□□□□ -0.28
TMEM173-208	ENST00000510817	DIDO1	Q9BTC0	2240 aa	Known RBP	13.32	□□□□□ -0.28
TMEM173-208	ENST00000510817	TLCD2	A6NGC4	264 aa		13.32	□□□□□ -0.28
TMEM173-208	ENST00000510817		A6NL46	340 aa		13.32	□□□□□ -0.28
TMEM173-208	ENST00000510817	ATMIN	O43313	823 aa	Predicted RBP	13.32	□□□□□ -0.28
TMEM173-208	ENST00000510817	KCNJ13	O60928	360 aa		13.32	□□□□□ -0.28
TMEM173-208	ENST00000510817	MMP2	P08253	660 aa		13.32	□□□□□ -0.28
TMEM173-208	ENST00000510817	RARA	P10276	462 aa		13.32	□□□□□ -0.28
TMEM173-208	ENST00000510817	CA4	P22748	312 aa		13.32	□□□□□ -0.28
TMEM173-208	ENST00000510817	DRG2	P55039	364 aa	Known RBP	13.32	□□□□□ -0.28
TMEM173-208	ENST00000510817	RRAD	P55042	308 aa		13.32	□□□□□ -0.28
TMEM173-208	ENST00000510817	UBE2H	P62256	183 aa		13.32	□□□□□ -0.28
TMEM173-208	ENST00000510817	ITK	Q08881	620 aa		13.32	□□□□□ -0.28
TMEM173-208	ENST00000510817	DMPK	Q09013	629 aa		13.32	□□□□□ -0.28
TMEM173-208	ENST00000510817	ZRSR2	Q15696	482 aa	Known RBP	13.32	□□□□□ -0.28
TMEM173-208	ENST00000510817	SEPT7	Q16181	437 aa	Known RBP	13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms