RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 PLEKHG4BQ96PX9 1271 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 VPS35Q96QK1 796 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 OR2M4Q96R27 311 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 NRTNQ99748 197 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 SCNM1Q9BWG6 230 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 ADGRE3Q9BY15 652 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 FRMD8P1Q9BZ68 369 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 GPR63Q9BZJ6 419 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 DDX47Q9H0S4 455 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 OR2AG1Q9H205 316 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 FAM83DQ9H4H8 585 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 FAM96AQ9H5X1 160 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 PHPT1Q9NRX4 125 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 GOLGA6AQ9NYA3 693 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 PKD2L2Q9NZM6 624 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 MARCH4Q9P2E8 410 aaPredicted RBP7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 KCNK6Q9Y257 313 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 JRKLQ9Y4A0 524 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 PCDHB1Q9Y5F3 818 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 PRSS21Q9Y6M0 314 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 CSNK1G3Q9Y6M4 447 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 PKD1L2Q7Z442 2459 aa7.12□□□□□ -1.27
TOPBP1-207ENST00000509162 GLYATL1P3A0A0U1RQE8 302 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 FAM221BA6H8Z2 402 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 B4DGG1 531 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 PGRMC1O00264 195 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 TPP1O14773 563 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 ZSCAN12O43309 604 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 NUAK1O60285 661 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 DFNA5O60443 496 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 BANF1O75531 89 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 PRAMEF1O95521 474 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 ACP5P13686 325 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 SDHBP21912 280 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 IVDP26440 423 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 FOXN2P32314 431 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 MAGEA3P43357 314 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 TERF1P54274 439 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 CFHR1Q03591 330 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 ACVR1Q04771 509 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 PTK2BQ14289 1009 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 TAF1AQ15573 450 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 CCDC157Q569K6 752 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 HES3Q5TGS1 186 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 ZCCHC8Q6NZY4 707 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 DUS1LQ6P1R4 473 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 OGFOD3Q6PK18 319 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 SLC30A9Q6PML9 568 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 EFL1Q7Z2Z2 1120 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 ZNF438Q7Z4V0 828 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 B3GNT8Q7Z7M8 397 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 CAND1Q86VP6 1230 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 ZNF761Q86XN6 746 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 RAVER1Q8IY67 606 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 BEND7Q8N7W2 519 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 ARL10Q8N8L6 244 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 RASGEF1AQ8N9B8 481 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 GPR150Q8NGU9 434 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 IFI44Q8TCB0 444 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 SLC37A2Q8TED4 501 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 BTN2A2Q8WVV5 523 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 CCDC74AQ96AQ1 378 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 CAPZA3Q96KX2 299 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 PWWP2AQ96N64 755 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 TRIM51Q9BSJ1 452 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 SPATA16Q9BXB7 569 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 FSD1LQ9BXM9 530 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 TRABDQ9H4I3 376 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 LRRC40Q9H9A6 602 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 EIF2B3Q9NR50 452 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 SYBUQ9NX95 663 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 ZDHHC3Q9NYG2 299 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 TAAR2Q9P1P5 351 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 VPS18Q9P253 973 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 SPASTQ9UBP0 616 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 TBC1D29Q9UFV1 150 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 ZNF148Q9UQR1 794 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 TCAF1Q9Y4C2 921 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 RNF215Q9Y6U7 377 aa7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 DSPP15924 2871 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-207ENST00000509162 KIF26BQ2KJY2 2108 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 IGLV3-16A0A075B6K0 115 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 CCDC162PA2VCL2 907 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 EME2A4GXA9 379 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 RGSL1A5PLK6 1076 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 H7C0S8 307 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 CES2O00748 559 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 KIF5CO60282 957 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 AVILO75366 819 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 SRP72O76094 671 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 CKMT2P17540 419 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 TPSB2P20231 275 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 MC4RP32245 332 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 CETN2P41208 172 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 GNG11P61952 73 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 UBE2IP63279 158 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 NFATC2Q13469 925 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 SEPT6Q14141 434 aa7.1□□□□□ -1.27
TOPBP1-207ENST00000509162 NR1D2Q14995 579 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms