RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 DNAJB8Q8NHS0 232 aa8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 FBXO27Q8NI29 283 aa8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 ENOX1Q8TC92 643 aaKnown RBP8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 RTP4Q96DX8 246 aa8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 SCRN2Q96FV2 425 aa8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 CCDC120Q96HB5 630 aa8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 ZNF599Q96NL3 588 aa8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 MCEEQ96PE7 176 aa8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 MCCC1Q96RQ3 725 aaPredicted RBP8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 EFHD1Q9BUP0 239 aa8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 TRIT1Q9H3H1 467 aaKnown RBP8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 CLSTN2Q9H4D0 955 aa8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 FBXO8Q9NRD0 319 aa8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 FAM207AQ9NSI2 230 aaPredicted RBP8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 TAB2Q9NYJ8 693 aa8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 TMEM9Q9P0T7 183 aa8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 PHTF1Q9UMS5 762 aa8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 MAN2B2Q9Y2E5 1009 aa8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 POLR3KQ9Y2Y1 108 aaPredicted RBP8.55□□□□□ -1.04
COL4A3BP-206ENST00000508809 ESPL1Q14674 2120 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 SEC16AO15027 2179 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 LOC101059948A0A1B0GTJ6 334 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 EFCAB7A8K855 629 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 EEF2KO00418 725 aaKnown RBP8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 SOD1P00441 154 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 LHCGRP22888 699 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 NFKBIAP25963 317 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 HSPA9P38646 679 aaKnown RBP8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 ZNF135P52742 658 aaPredicted RBP8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 SLC10A7Q0GE19 358 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 ABHD18Q0P651 414 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 MAMLD1Q13495 774 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 KRT31Q15323 416 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 PYCR3Q53H96 274 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 RALGPS1Q5JS13 557 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 ANKS6Q68DC2 871 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 ACAD10Q6JQN1 1059 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 DCUN1D2Q6PH85 259 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 WDR74Q6RFH5 385 aaPredicted RBP8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 RFX8Q6ZV50 586 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 Q6ZVL8 140 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 CYP4V2Q6ZWL3 525 aaPredicted RBP8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 TIPARPQ7Z3E1 657 aaKnown RBP8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 HSD11B1LQ7Z5J1 315 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 PSTKQ8IV42 348 aaKnown RBP8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 NLGN4XQ8N0W4 816 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 SFRP1Q8N474 314 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 LZTR1Q8N653 840 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 NPWQ8N729 165 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 NLGN4YQ8NFZ3 816 aaPredicted RBP8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 C9orf43Q8TAL5 461 aaPredicted RBP8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 NUDCD1Q96RS6 583 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 AGPAT1Q99943 283 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 ZPBPQ9BS86 351 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 DHX35Q9H5Z1 703 aaKnown RBP8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 SP110Q9HB58 689 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 GPATCH2LQ9NWQ4 482 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 PLEKHM1Q9Y4G2 1056 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 RNF114Q9Y508 228 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 TMEM184BQ9Y519 407 aaPredicted RBP8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 PCDHB14Q9Y5E9 798 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 CREBBPQ92793 2442 aa8.54□□□□□ -1.04
COL4A3BP-206ENST00000508809 ITPR2Q14571 2701 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 LRRC10BA6NIK2 292 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 DFFAO00273 331 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 DAPK3O43293 454 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 DUX1O43812 170 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 CYP2A6P11509 494 aaPredicted RBP8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 ACTR1BP42025 376 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 ZNF165P49910 485 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 ACTR1AP61163 376 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 MC1RQ01726 317 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 BIRC2Q13490 618 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 DPYSQ14117 519 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 NCAPHQ15003 741 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 RAET1GQ6H3X3 334 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 PLEKHA7Q6IQ23 1121 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 CEACAM20Q6UY09 585 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 ATG4DQ86TL0 474 aaPredicted RBP8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 FAM129CQ86XR2 697 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 RAVER1Q8IY67 606 aaKnown RBP8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 PGBD5Q8N414 524 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 FAM26EQ8N5C1 309 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 FNIP1Q8TF40 1166 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 RNF141Q8WVD5 230 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 APOBEC4Q8WW27 367 aaKnown RBP8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 PIH1D2Q8WWB5 315 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 MIB2Q96AX9 1013 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 COX14Q96I36 57 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 PEBP4Q96S96 227 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 SLC38A3Q99624 504 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 MGME1Q9BQP7 344 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 SYT11Q9BT88 431 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 SNRNP25Q9BV90 132 aaKnown RBP8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 ABCG8Q9H221 673 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 GPN2Q9H9Y4 310 aaPredicted RBP8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 NOD2Q9HC29 1040 aa8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 ZNF71Q9NQZ8 489 aaPredicted RBP8.53□□□□□ -1.04
COL4A3BP-206ENST00000508809 GPATCH2Q9NW75 528 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms