RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 MNS1Q8NEH6 495 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 TSTD1Q8NFU3 115 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 OR2A12Q8NGT7 310 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 ASB15Q8WXK1 588 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 SORCS1Q8WY21 1168 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 RAB7BQ96AH8 199 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 PPP1R16AQ96I34 528 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 TEKT5Q96M29 485 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 NUDCD1Q96RS6 583 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 LGMNQ99538 433 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 SLC25A51Q9H1U9 297 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 RSPH9Q9H1X1 276 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 KCNH6Q9H252 994 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 EPHX3Q9H6B9 360 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 ATP13A3Q9H7F0 1226 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 USP29Q9HBJ7 922 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 PRSS16Q9NQE7 514 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 PRMT8Q9NR22 394 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 VPS45Q9NRW7 570 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 RBM12Q9NTZ6 932 aaKnown RBP5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 RBM22Q9NW64 420 aaKnown RBP eCLIP5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 GOLGA6AQ9NYA3 693 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 DKK3Q9UBP4 350 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 IL36AQ9UHA7 158 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 ZFP69BQ9UJL9 534 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 DNPEPQ9ULA0 475 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 ZNF148Q9UQR1 794 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 AAR2Q9Y312 384 aaKnown RBP5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 GON4LQ3T8J9 2241 aa5.52□□□□□ -1.53
HMGB1P44-201ENST00000508597 PLXND1Q9Y4D7 1925 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 A0A1W2PQF6 199 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 ERI2A8K979 691 aaKnown RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 K7ERQ8 282 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 AP3B1O00203 1094 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 INSIG1O15503 277 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 KCNN4O15554 427 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 SLC7A4O43246 635 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 SMAD6O43541 496 aaKnown RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 PHF2O75151 1096 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 GAS8O95995 478 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 PDGFBP01127 241 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 EPOP01588 193 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 JCHAINP01591 159 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 IGLV3-19P01714 112 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 DNTTP04053 509 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 DCNP07585 359 aaKnown RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 ACADMP11310 421 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 PRKCHP24723 683 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 PTPN3P26045 913 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 RBL1P28749 1068 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 SERPINA4P29622 427 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 OXTRP30559 389 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 FDFT1P37268 417 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 COILP38432 576 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 TNNT3P45378 269 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 CCNHP51946 323 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 COPAP53621 1224 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 RPL26P61254 145 aaKnown RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 TUBB4BP68371 445 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 SATB1Q01826 763 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 BCL2L1Q07817 233 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 SLC10A7Q0GE19 358 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 WASHC5Q12768 1159 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 MTAPQ13126 283 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 MPP3Q13368 585 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 DHX34Q14147 1143 aaKnown RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 PRPSAP1Q14558 356 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 LLGL1Q15334 1064 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 PARP6Q2NL67 630 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 INAVAQ3KP66 663 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 TTC31Q49AM3 519 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 ZNF805Q5CZA5 627 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 ANKRD20A2Q5SQ80 823 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 ANKRD20A1Q5TYW2 823 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 ANKRD20A3Q5VUR7 823 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 NEK5Q6P3R8 708 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 NCEH1Q6PIU2 408 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 BRAT1Q6PJG6 821 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 CCDC137Q6PK04 289 aaKnown RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 LINGO4Q6UY18 593 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 DPY19L3Q6ZPD9 716 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 Q6ZS52 159 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 FRMD7Q6ZUT3 714 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 ZNF572Q7Z3I7 529 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 MAATS1Q7Z4T9 603 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 TMPRSS6Q8IU80 811 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 SFTPA1Q8IWL2 248 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 RAVER1Q8IY67 606 aaKnown RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 CCDC33Q8N5R6 958 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 PRELID2Q8N945 189 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 CCDC89Q8N998 374 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 PRCCQ92733 491 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 SLCO2A1Q92959 643 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 MAGOHBQ96A72 148 aaKnown RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 MBD6Q96DN6 1003 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 SIPA1Q96FS4 1042 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 AHCYL2Q96HN2 611 aaKnown RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 SPATA13Q96N96 652 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 FCRL5Q96RD9 977 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 ACOX2Q99424 681 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms