RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CSTF2P33240 577 aaKnown RBP eCLIP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 NUDT1P36639 197 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 SLC1A1P43005 524 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 GPD2P43304 727 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 GMPSP49915 693 aaPredicted RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 ZNF132P52740 706 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 STX1BP61266 288 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 CTAG1AP78358 180 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 OLR1P78380 273 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 MECOMQ03112 1051 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 KLRC3Q07444 240 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 FCHO2Q0JRZ9 810 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 TRAP1Q12931 704 aaKnown RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 FOXD4Q12950 439 aaPredicted RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 THOC5Q13769 683 aaKnown RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 C16orf72Q14CZ0 275 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 LARS2Q15031 903 aaKnown RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 SEC23BQ15437 767 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 MOGQ16653 247 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 PTPROQ16827 1216 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 TRIM16LQ309B1 348 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 MYLK3Q32MK0 819 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 EDRF1Q3B7T1 1238 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 TAF1BQ53T94 588 aaPredicted RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 TCHHL1Q5QJ38 904 aaPredicted RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 CACHD1Q5VU97 1274 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 METTL21CQ5VZV1 264 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 CCSAPQ6IQ19 270 aaPredicted RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 TTI2Q6NXR4 508 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 APOA5Q6Q788 366 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 UGT2A3Q6UWM9 527 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 KSR2Q6VAB6 950 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 DCDC5Q6ZRR9 648 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 RRAGAQ7L523 313 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 MCM10Q7L590 875 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 MAEAQ7L5Y9 396 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 SLFN11Q7Z7L1 901 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 SATL1Q86VE3 508 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 ZNF410Q86VK4 478 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 TDRPQ86YL5 185 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 GRAMD2AQ8IUY3 354 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 ANKRD13AQ8IZ07 590 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 ZNF34Q8IZ26 560 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 MYO1HQ8N1T3 1032 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 TRIML2Q8N7C3 387 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 PCYOX1LQ8NBM8 494 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 RBM15BQ8NDT2 890 aaKnown RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 MAFAQ8NHW3 353 aaPredicted RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 TTC8Q8TAM2 541 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 ADAMTS15Q8TE58 950 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 TRUB1Q8WWH5 349 aaKnown RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 MAML1Q92585 1016 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 APBB2Q92870 758 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 SLCO2A1Q92959 643 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 CTHRC1Q96CG8 243 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 MTBPQ96DY7 904 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 MS4A14Q96JA4 679 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 CNDP2Q96KP4 475 aaKnown RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 PSD2Q9BQI7 771 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 CADM1Q9BY67 442 aaKnown RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 MRPL1Q9BYD6 325 aaKnown RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 SHCBP1LQ9BZQ2 653 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 ZNF287Q9HBT7 754 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 C8orf4Q9NR00 106 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 AGPAT5Q9NUQ2 364 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 MRGBPQ9NV56 204 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 COMMD8Q9NX08 183 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 STMN3Q9NZ72 180 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 ARMCX3Q9UH62 379 aaPredicted RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 AMACRQ9UHK6 382 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 PNMA8BQ9ULN7 279 aaPredicted RBP4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 CDY1Q9Y6F8 540 aa4.59□□□□□ -1.67
PDLIM5-211ENST00000508531 VCANP13611 3396 aa4.59□□□□□ -1.68
PDLIM5-211ENST00000508531 RANBP2P49792 3224 aaKnown RBP4.59□□□□□ -1.68
PDLIM5-211ENST00000508531 AKAP11Q9UKA4 1901 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 SCN11AQ9UI33 1791 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 DLEC1Q9Y238 1755 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 FLT4P35916 1363 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 ZMYM2Q9UBW7 1377 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 CNTNAP2Q9UHC6 1331 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 IGKV2D-30A0A075B6S6 120 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 ZSCAN5CA6NGD5 496 aaPredicted RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 LRRC53A6NM62 1247 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 BOLA2-SMG1P6H3BVE0 249 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 M0R3H8 397 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 VWA5AO00534 786 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 ZNF263O14978 683 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 PHGDHO43175 533 aaKnown RBP4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 SPRY2O43597 315 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 NCK2O43639 380 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 BUB1O43683 1085 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 ITM2AO43736 263 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 SNX2O60749 519 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 BBOX1O75936 387 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 CAMTA2O94983 1202 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 RASAL1O95294 804 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 STAMBPO95630 424 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 H2AFZP0C0S5 128 aa4.58□□□□□ -1.68
PDLIM5-211ENST00000508531 CBSLP0DN79 551 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms