RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 CLEC17AQ6ZS10 378 aa4.23□□□□□ -1.73
UBE2D3-225ENST00000508476 CPLX4Q7Z7G2 160 aa4.23□□□□□ -1.73
UBE2D3-225ENST00000508476 TSPAN33Q86UF1 283 aa4.23□□□□□ -1.73
UBE2D3-225ENST00000508476 ARHGAP12Q8IWW6 846 aa4.23□□□□□ -1.73
UBE2D3-225ENST00000508476 RNF168Q8IYW5 571 aaPredicted RBP4.23□□□□□ -1.73
UBE2D3-225ENST00000508476 ZNF843Q8N446 348 aa4.23□□□□□ -1.73
UBE2D3-225ENST00000508476 GCSAMQ8N6F7 178 aa4.23□□□□□ -1.73
UBE2D3-225ENST00000508476 C1orf52Q8N6N3 182 aaKnown RBP4.23□□□□□ -1.73
UBE2D3-225ENST00000508476 RFFLQ8WZ73 363 aa4.23□□□□□ -1.73
UBE2D3-225ENST00000508476 PRMT6Q96LA8 375 aaPredicted RBP4.23□□□□□ -1.73
UBE2D3-225ENST00000508476 SEMA6AQ9H2E6 1030 aa4.23□□□□□ -1.73
UBE2D3-225ENST00000508476 APOBEC3GQ9HC16 384 aaKnown RBP4.23□□□□□ -1.73
UBE2D3-225ENST00000508476 ZBTB20Q9HC78 741 aaPredicted RBP4.23□□□□□ -1.73
UBE2D3-225ENST00000508476 MBNL1Q9NR56 388 aaKnown RBP4.23□□□□□ -1.73
UBE2D3-225ENST00000508476 RRP7BPQ9NSQ0 103 aa4.23□□□□□ -1.73
UBE2D3-225ENST00000508476 ADPRHL2Q9NX46 363 aa4.23□□□□□ -1.73
UBE2D3-225ENST00000508476 TMEM184BQ9Y519 407 aaPredicted RBP4.23□□□□□ -1.73
UBE2D3-225ENST00000508476 FLT1P17948 1338 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 A0A087X002 238 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 TEX13DA0A0J9YY54 714 aaPredicted RBP4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 ERI2A8K979 691 aaKnown RBP4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 NR5A2O00482 541 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 BUD23O43709 281 aaKnown RBP4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 NDUFS3O75489 264 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 GCNT3O95395 438 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 ANXA7P20073 488 aaKnown RBP4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 ACADLP28330 430 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 PIK3CAP42336 1068 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 NR2C2P49116 596 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 CTSCP53634 463 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 GOLGA8DPQ0D2H9 430 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 DUOXA1Q1HG43 343 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 INTS11Q5TA45 600 aaKnown RBP4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 NDUFAF5Q5TEU4 345 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 GLDNQ6ZMI3 551 aaPredicted RBP4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 MYPOPQ86VE0 399 aaPredicted RBP4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 CEP97Q8IW35 865 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 PCYOX1LQ8NBM8 494 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 RDM1Q8NG50 284 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 PPP4R1Q8TF05 950 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 C1orf74Q96LT6 269 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 TMEM39BQ9GZU3 492 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 RAD21L1Q9H4I0 556 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 PELI2Q9HAT8 420 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 SETD4Q9NVD3 440 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 PGAP2Q9UHJ9 254 aa4.22□□□□□ -1.73
UBE2D3-225ENST00000508476 A0A0G2JLW4 131 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 A6NL46 340 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 H0YIN7 160 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 TMEM189-UBE2V1I3L0A0 370 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 J3QR06 171 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 PLK4O00444 970 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 PLOD2O00469 737 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 ZBTB43O43298 467 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 ZNF821O75541 412 aaPredicted RBP4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 DAB1O75553 588 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 EIF2S1P05198 315 aaKnown RBP4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 GNAZP19086 355 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 UBE2V1Q13404 147 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 KRT71Q3SY84 523 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 ZNF772Q68DY9 489 aaPredicted RBP4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 PTOV1Q86YD1 416 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 GSDMBQ8TAX9 411 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 SGCDQ92629 289 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 SEMA4DQ92854 862 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 ELMOD3Q96FG2 381 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 ZNF599Q96NL3 588 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 TSPYL4Q9UJ04 414 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 YIPF1Q9Y548 306 aa4.21□□□□□ -1.74
UBE2D3-225ENST00000508476 OR2M5A3KFT3 312 aa4.2□□□□□ -1.74
UBE2D3-225ENST00000508476 SMAD9O15198 467 aaKnown RBP4.2□□□□□ -1.74
UBE2D3-225ENST00000508476 EXTL3O43909 919 aa4.2□□□□□ -1.74
UBE2D3-225ENST00000508476 IGHV4-38-2P0DP08 117 aa4.2□□□□□ -1.74
UBE2D3-225ENST00000508476 MSH2P43246 934 aa4.2□□□□□ -1.74
UBE2D3-225ENST00000508476 MVPQ14764 893 aaKnown RBP4.2□□□□□ -1.74
UBE2D3-225ENST00000508476 LCE3CQ5T5A8 94 aa4.2□□□□□ -1.74
UBE2D3-225ENST00000508476 MFSD6Q6ZSS7 791 aa4.2□□□□□ -1.74
UBE2D3-225ENST00000508476 WDR20Q8TBZ3 569 aa4.2□□□□□ -1.74
UBE2D3-225ENST00000508476 TRPC4APQ8TEL6 797 aa4.2□□□□□ -1.74
UBE2D3-225ENST00000508476 ARHGEF2Q92974 986 aaKnown RBP4.2□□□□□ -1.74
UBE2D3-225ENST00000508476 GAD1Q99259 594 aa4.2□□□□□ -1.74
UBE2D3-225ENST00000508476 SLC26A6Q9BXS9 759 aa4.2□□□□□ -1.74
UBE2D3-225ENST00000508476 RCC2Q9P258 522 aaKnown RBP4.2□□□□□ -1.74
UBE2D3-225ENST00000508476 TMEM98Q9Y2Y6 226 aa4.2□□□□□ -1.74
UBE2D3-225ENST00000508476 MAGEB17A8MXT2 336 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 CLIC2O15247 247 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 NPHP1O15259 732 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 OGG1O15527 345 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 TBX18O95935 607 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 RNF224P0DH78 156 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 ZNF26P17031 533 aaPredicted RBP4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 CBLP22681 906 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 NFKBIAP25963 317 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 GPR143P51810 404 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 EIF4A2Q14240 407 aaKnown RBP4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 TMEM187Q14656 261 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 KIAA1644Q3SXP7 199 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 ASPRV1Q53RT3 343 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 GKAP1Q5VSY0 366 aaPredicted RBP4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 ZNF790Q6PG37 636 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms